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The map label for this gene is ycnE [H]

Identifier: 226225125

GI number: 226225125

Start: 2626604

End: 2626897

Strand: Direct

Name: ycnE [H]

Synonym: Lm4b_02546

Alternate gene names: 226225125

Gene position: 2626604-2626897 (Clockwise)

Preceding gene: 226225124

Following gene: 226225133

Centisome position: 90.18

GC content: 38.78

Gene sequence:

>294_bases
ATGCTACATATACAAGCAAAAGTCCAAGTTAAACCTGATTTAGTAGCGGAATTCTTGGTGGAAGTGAATTTAGTAATCCA
AGGCTCGCTTTCAGAAACCGAAAATCATGGCTACGAATTGGTTCACTCTGTAGAAAACGCAAATATTTTCTATATTCTAG
AAAAGTGGACTGATGAAGCAGCAATTCAGTTTCATAACGGGACAGAGCATTATAAACGTTTCAAAAAAAATGTCCCCGCT
TTTTTAGCAATGCCGATTGAGGTGGATTTACTTGCGCCAGTTGAGCGACGATAG

Upstream 100 bases:

>100_bases
CATGAAACATCTGAAAGTATCGAAAAAACACATTGGTTCTTAGAGAAATCGAGCCCCGAAAAAAAAGAAATTAAATTAAT
TTCTAAATAGGAGGAATAAT

Downstream 100 bases:

>100_bases
TATTTTTTAACAAGAATTTTTTTTGCAACTAACATCATTTTCGTCTTAGTAAAGATAAACTTACCTGTATTAGTATAGCC
TTCTTTTGTGCGGATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSVENANIFYILEKWTDEAAIQFHNGTEHYKRFKKNVPA
FLAMPIEVDLLAPVERR

Sequences:

>Translated_97_residues
MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSVENANIFYILEKWTDEAAIQFHNGTEHYKRFKKNVPA
FLAMPIEVDLLAPVERR
>Mature_97_residues
MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSVENANIFYILEKWTDEAAIQFHNGTEHYKRFKKNVPA
FLAMPIEVDLLAPVERR

Specific function: Putative monooxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lsrG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 11172; Mature: 11172

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSVENANIFYILEKWTDEA
CEEEEEEEEECHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCE
AIQFHNGTEHYKRFKKNVPAFLAMPIEVDLLAPVERR
EEEECCCHHHHHHHHHCCCEEEEECEEEEEECCCCCC
>Mature Secondary Structure
MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSVENANIFYILEKWTDEA
CEEEEEEEEECHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCE
AIQFHNGTEHYKRFKKNVPAFLAMPIEVDLLAPVERR
EEEECCCHHHHHHHHHCCCEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]