| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225124
Identifier: 226225124
GI number: 226225124
Start: 2625718
End: 2626593
Strand: Direct
Name: 226225124
Synonym: Lm4b_02545
Alternate gene names: NA
Gene position: 2625718-2626593 (Clockwise)
Preceding gene: 226225111
Following gene: 226225125
Centisome position: 90.15
GC content: 36.19
Gene sequence:
>876_bases GTGAAGAAATATTTTATAACAATCATGATTTTACTTTTTGGCGCGTTATTTCTCAGTGCTTGTCAAAAAGATGACGAGGT TGAAAATTCTTCTCCTCCTAAAGTAGACTTAAAAAACGAAATACCCATTATTTTAATTCATGGGAGCGGTGGCGATACAC ATTCTTTAGATGAAATGGCAGATCACTTAATGAATGAATACAAAAGTTCTAATGAAGCAATGTCAATGTCAATTAACTCA AAAGGAAAAATCACATACCAAGGCAAGCTAACAAAAGATGCCAAACGTCCCATTATCAAATTTGGCTTCGACCAAAACCA AGCAACTCCAGATGATTGGTCTAAATGGTTAAAAATCGCAATGGAAGATTTGAAGTCACGTTACGGTTTCACACAAATGG ACGGAGTTGGTCATTCTAACGGCGGCTTGGCTTTAACTTATTTTGCAGAAGACTACTCTAATGACAACGCGGTCCCTACT CTGCGCAAATTAGTTGCTATTGGCTCTCCTTTTAATGATTTGGACCCAGACGATAATGGCGAAGATTTAGCTTTTAATAA ATTACCATCCAACACCCCTCAACTAGATTATTTTATTGACAAGGAGACTAAAATTAGTACTGACCTAGAAGTACTATCCA TTGCTGGAGCTCTTAGTGAAGATAATTTAACCGATGGTATTGTCCCAACGAATAGTTCACTCGCTTCCAGACTTTTCATG CCTAATAACGCAAAAGTCTATATGGAAGATTTACAAGTTGGTGAAAGTGCTATTCACCAAACATTGCATGAAACATCTGA AAGTATCGAAAAAACACATTGGTTCTTAGAGAAATCGAGCCCCGAAAAAAAAGAAATTAAATTAATTTCTAAATAG
Upstream 100 bases:
>100_bases TTCTAAATTTCCGTTATTATGTACCTCGATTATAGACGAGTTTCGCATGATTGTCACGCCGATATTTGGTATACTAAATG GGAATGGAGGACGATAATTA
Downstream 100 bases:
>100_bases GAGGAATAATATGCTACATATACAAGCAAAAGTCCAAGTTAAACCTGATTTAGTAGCGGAATTCTTGGTGGAAGTGAATT TAGTAATCCAAGGCTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Surface Hydrolase; Lipoprotein; Lipase/Esterase; Cell Surface Hydrolase Membrane-Bound; Extracellular Lipase/Esterase; Hydrolase; Alpha/Beta Hydrolase; Ypothetical Protein SMU.; Cell Surface Hydrolas; Acyltransferase; Secreted Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNEYKSSNEAMSMSINS KGKITYQGKLTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPT LRKLVAIGSPFNDLDPDDNGEDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM PNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK
Sequences:
>Translated_291_residues MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNEYKSSNEAMSMSINS KGKITYQGKLTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPT LRKLVAIGSPFNDLDPDDNGEDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM PNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK >Mature_291_residues MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNEYKSSNEAMSMSINS KGKITYQGKLTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPT LRKLVAIGSPFNDLDPDDNGEDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM PNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32452; Mature: 32452
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHH DHLMNEYKSSNEAMSMSINSKGKITYQGKLTKDAKRPIIKFGFDQNQATPDDWSKWLKIA HHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHCCEEEECCCCCCCCHHHHHHHHHHH MEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDNG HHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM CCEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC PNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECC >Mature Secondary Structure MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHH DHLMNEYKSSNEAMSMSINSKGKITYQGKLTKDAKRPIIKFGFDQNQATPDDWSKWLKIA HHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHCCEEEECCCCCCCCHHHHHHHHHHH MEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDNG HHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM CCEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC PNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA