| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is mdxE [H]
Identifier: 226224732
GI number: 226224732
Start: 2208167
End: 2209426
Strand: Reverse
Name: mdxE [H]
Synonym: Lm4b_02149
Alternate gene names: 226224732
Gene position: 2209426-2208167 (Counterclockwise)
Preceding gene: 226224733
Following gene: 226224731
Centisome position: 75.86
GC content: 36.83
Gene sequence:
>1260_bases ATGAAGCGTTTCAAAAAAGTGGGAATAGTTTCGGCGGTTTTAGTAATGGCTTTAAGCTTAGCAGCATGTGGTGGTGGAAA AGACACTAGTAAATCTGGCTCATCTGATGAAAAAACATTAACGGTTTCCGTTGACGCAGGCTACAAAGACTACGTGAACA AAATAAAAGGTGATTTTGAAAAAGATAATGACGTGAAAGTAAAAGTAGTCGAAAAAGACATGTTCGAAACATTAGAAGCA TTGCCACTTGATGGCCCGGCTGGAACTGCTCCAGACGTAATGATGTCCGCATTTGATAGAATTGGAAGCTTAGGCCAACA AGGACATTTAGCGGAAGTAAAACTTGGAAATAAAGACGATTACGATGAAAAAGACCAAAAACAAGTAACCATTGACGATA AAATTTATGGCGCTCCAGCAATTATTGAAACTCTAGTACTTTACTATAATAAAGATTTACTCGACAAAGCTCCAGCAACT TTCAAAGATTTAGAAACACTTTCTAAAGATTCTCGTTTTGCCTTCACTTCTGAAAAAGGAAAAAATACTGGTTTCTTAGC AAAATGGACTGATTTCTACTTCTCTTACGGACTACTTGCAGGATACGGTGGTTATGTATTCGGCGATGAAGGTACGAATC CAAAAGACATCGGTTTAAACAATAAAGGTTCGGTTGAAGGAATTACTTATGCAACAAAATGGTTCCAAGATGTATGGCCA AAAGGTATGCAAGACAATAAGAGTGCAGATGACTTTATCCAAGATCAATTTGTTAAAGGTAAAGCAGCGGCAATTCTAGG CGGTCCATGGTCAGCAGCAAACTACAAAGAAGCAAAAATTAATTACGGCGTAGCAAAAATCCCGACACTAAACAATGGCA AAGAATACTCTCCATTTGCAGGCGGTAAAGGTTGGGTTGTAAGTAACTATTCTAAAAACAAAGATGTAGCTCAAAAATGG TTGGATTATGTAACTAACCAAAAAAATCAAGAAACTTTATATGATATGACAAATGAAGTACCAGCTAACTTAAAAGCACG CGATACAGCGAAATCAAAAAATGATGAATTAACTAATGCTGTTATCGAACAATACAAAAATGCGCAACCAATGCCAAATA TTCCAGAAATGTCGGAAGTTTGGACAGGTGCTGAAAACTTAATGTTTGATGCAGCTTCTGGTTCGAAAACACCGCAACAA TCAGCAGATGATGCAGTAAAAGTAATTGAAGATAACGTAACGCAAAAATATACTAAATAA
Upstream 100 bases:
>100_bases GTTAACCTAATTCACAAACTTTAAAAAGAATTGAAAAAAGATGGGGACTTAGAAATCAGACAGTAAAGGGCGACTTTTTC ATAAAGAGGAGGAAAAGTAA
Downstream 100 bases:
>100_bases TAATGATTTGGCGGGGCAAAGATAGCGCGCTCCGCCATTTTTTTCAACTTAGCTAGTGAATCTATATCTAGAATTGAGGG TAACAAAATGAAACTAGAAC
Product: maltose/maltodextrin ABC-transporter (binding protein)
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSVDAGYKDYVNKIKGDFEKDNDVKVKVVEKDMFETLEA LPLDGPAGTAPDVMMSAFDRIGSLGQQGHLAEVKLGNKDDYDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPAT FKDLETLSKDSRFAFTSEKGKNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIGLNNKGSVEGITYATKWFQDVWP KGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYKEAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKW LDYVTNQKNQETLYDMTNEVPANLKARDTAKSKNDELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLMFDAASGSKTPQQ SADDAVKVIEDNVTQKYTK
Sequences:
>Translated_419_residues MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSVDAGYKDYVNKIKGDFEKDNDVKVKVVEKDMFETLEA LPLDGPAGTAPDVMMSAFDRIGSLGQQGHLAEVKLGNKDDYDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPAT FKDLETLSKDSRFAFTSEKGKNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIGLNNKGSVEGITYATKWFQDVWP KGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYKEAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKW LDYVTNQKNQETLYDMTNEVPANLKARDTAKSKNDELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLMFDAASGSKTPQQ SADDAVKVIEDNVTQKYTK >Mature_419_residues MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSVDAGYKDYVNKIKGDFEKDNDVKVKVVEKDMFETLEA LPLDGPAGTAPDVMMSAFDRIGSLGQQGHLAEVKLGNKDDYDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPAT FKDLETLSKDSRFAFTSEKGKNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIGLNNKGSVEGITYATKWFQDVWP KGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYKEAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKW LDYVTNQKNQETLYDMTNEVPANLKARDTAKSKNDELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLMFDAASGSKTPQQ SADDAVKVIEDNVTQKYTK
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Binds maltodextrin. Can also bind maltose with low affinity, but is not involved in its uptake [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=423, Percent_Identity=28.8416075650118, Blast_Score=144, Evalue=1e-35,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46020; Mature: 46020
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSVDAGYKDYVNKIKGDFE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCC KDNDVKVKVVEKDMFETLEALPLDGPAGTAPDVMMSAFDRIGSLGQQGHLAEVKLGNKDD CCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCC YDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPATFKDLETLSKDSRFAFTSEKG CCCCCCCEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHHCCCCCEEEECCCC KNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIGLNNKGSVEGITYATKWFQDVWP CCCCEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC KGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYKEAKINYGVAKIPTLNNGKEYSPFA CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCC GGKGWVVSNYSKNKDVAQKWLDYVTNQKNQETLYDMTNEVPANLKARDTAKSKNDELTNA CCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH VIEQYKNAQPMPNIPEMSEVWTGAENLMFDAASGSKTPQQSADDAVKVIEDNVTQKYTK HHHHHHCCCCCCCCCCHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSVDAGYKDYVNKIKGDFE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCC KDNDVKVKVVEKDMFETLEALPLDGPAGTAPDVMMSAFDRIGSLGQQGHLAEVKLGNKDD CCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCC YDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPATFKDLETLSKDSRFAFTSEKG CCCCCCCEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHHCCCCCEEEECCCC KNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIGLNNKGSVEGITYATKWFQDVWP CCCCEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC KGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYKEAKINYGVAKIPTLNNGKEYSPFA CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCC GGKGWVVSNYSKNKDVAQKWLDYVTNQKNQETLYDMTNEVPANLKARDTAKSKNDELTNA CCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH VIEQYKNAQPMPNIPEMSEVWTGAENLMFDAASGSKTPQQSADDAVKVIEDNVTQKYTK HHHHHHCCCCCCCCCCHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]