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The map label for this gene is ybbP [H]

Identifier: 226224726

GI number: 226224726

Start: 2200382

End: 2201203

Strand: Reverse

Name: ybbP [H]

Synonym: Lm4b_02143

Alternate gene names: 226224726

Gene position: 2201203-2200382 (Counterclockwise)

Preceding gene: 226224727

Following gene: 226224725

Centisome position: 75.57

GC content: 37.47

Gene sequence:

>822_bases
ATGGATTTTTCCAATATGTCGATATTGCATTATCTAGCAAATATTGTAGATATTCTTGTCGTATGGTTTGTAATTTATAA
AGTGATCATGTTAATCCGAGGTACAAAAGCAGTACAATTATTAAAAGGCATTTTTATTATCATTGCAGTCAAACTATTAA
GCGGATTTTTTGGTCTCCAAACAGTAGAATGGATTACGGATCAGATGCTTACTTGGGGATTCCTTGCAATTATAATTATC
TTCCAACCGGAATTACGCCGTGCTTTAGAAACGCTTGGACGAGGCAATATTTTTACTCGTTATGGATCAAGAATAGAGCG
TGAACAGCATCATTTAATCGAGTCTATCGAAAAGTCTACCCAGTATATGGCAAAACGTCGAATTGGGGCGCTGATTTCAG
TGGCGCGCGATACAGGCATGGACGATTATATTGAAACAGGGATTCCGTTAAATGCAAAAATTTCTTCTCAATTATTAATT
AATATTTTTATTCCGAATACACCGCTTCATGATGGAGCAGTTATTATTAAAGGAAACGAAATTGCATCGGCAGCAAGTTA
CTTGCCACTTTCAGATAGCCCGTTCTTATCCAAAGAACTTGGAACGCGTCACCGGGCTGCACTTGGGATTAGTGAAGTGA
CAGATAGTATTACGATTGTAGTTTCTGAAGAGACTGGCGGAATTTCCCTAACTAAAGGTGGAGAACTTTTCCGTGATGTG
TCAGAAGAAGAGTTACATAAAATTCTTCTTAAAGAACTAGTCACAGTAACTGCAAAGAAACCTTCTATCTTTTCTAAATG
GAAAGGAGGCAAAAGCGAATGA

Upstream 100 bases:

>100_bases
TGGCGGGACGATTGCTTTTTCCACCTGCACTCTTATGCTATAATAAAGAATGTGAACCATGTGATCATAAATGGTTTTCA
AGAGGCACGGAGGTGAAGTG

Downstream 100 bases:

>100_bases
TGGATCGAATTTTAAATAACAAATGGTCGATTCGGATTGTAGCCTTACTACTCGCAGCCATCCTTTTTACATCAGTTAAT
GCAAATAATAATAACGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIII
FQPELRRALETLGRGNIFTRYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLI
NIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDV
SEEELHKILLKELVTVTAKKPSIFSKWKGGKSE

Sequences:

>Translated_273_residues
MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIII
FQPELRRALETLGRGNIFTRYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLI
NIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDV
SEEELHKILLKELVTVTAKKPSIFSKWKGGKSE
>Mature_273_residues
MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIII
FQPELRRALETLGRGNIFTRYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLI
NIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDV
SEEELHKILLKELVTVTAKKPSIFSKWKGGKSE

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 30445; Mature: 30445

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVEWITDQMLTWGFLAIIIIFQPELRRALETLGRGNIFTRYGSRIEREQHHLIESIEKST
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
QYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVIIKGNE
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCH
IASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDV
HHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCHHHHHCC
SEEELHKILLKELVTVTAKKPSIFSKWKGGKSE
CHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVEWITDQMLTWGFLAIIIIFQPELRRALETLGRGNIFTRYGSRIEREQHHLIESIEKST
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
QYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVIIKGNE
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCH
IASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDV
HHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCHHHHHCC
SEEELHKILLKELVTVTAKKPSIFSKWKGGKSE
CHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]