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The map label for this gene is 226224692

Identifier: 226224692

GI number: 226224692

Start: 2163741

End: 2165012

Strand: Reverse

Name: 226224692

Synonym: Lm4b_02107

Alternate gene names: NA

Gene position: 2165012-2163741 (Counterclockwise)

Preceding gene: 226224693

Following gene: 226224691

Centisome position: 74.33

GC content: 33.1

Gene sequence:

>1272_bases
ATGAACTTAATCGGTTTGCGAATTAAAAATATTCGTAAAGAGAAACAGCTGACATTAAAAGACGTAGCGCAAGGAATTAT
CTCTGTGCCTTATTTAGCAAATATAGAAAATGGTATTAAAGTTGCTTCTTTGGAAACGTTGATACACATAGCAAGAAGGT
TAGAAATACCGGAAGAAGTGTTATTGATGAGCGAAGATGAAGAGAATAGAGCACTTTTGAAAGAATTGGATGAGATTTTT
AAACTATTGGTTTGTTCTAATCCTAAAGAAATAGAAAGTAGATTAAAGAAAATAGCGGAAAATGTAGAGCTGCAGCACGA
ATCACCAGCTGTCGAACTTAGCTTTTATTGTTTACAGGTGGCATTTTATTATAAGACTTGGAAATTTTCAAGAGCGGAAG
AAGTGGAAGCTAAATATTTAAAGAACGCAGAAAAACGAGTGGAAAATGCTTTCCCGCCCCAATTGCTTTCCTACTATTAT
TACGGTCAGGCAGTAAAACATTCTCATGCAACGTGTAATTATCAATTAGCAGTGGAGTACTGGGAAAAGTGTGTTGCTCT
CACTGATAATAAAAATTTTCTCACTGTTTTTCATGTGTGCATCTGCATTAATTATATTTGCCAAAGTATTTATGAACCCG
CACTTGGACATATCCAGCAAGCGTGGGATTTAATAAAGGATGAAGAGCAGGAACGTTTTGTCTCTATTCTTTATTTCTAC
GGTTACATTTATTTTCAAATTGGCTTTATTGGTGAGGCAAAATACAGATTTAAACAAGCACAAAAGTACTTTTCCAAATA
TCCAGAAGCTAAAAAAATCTATTATTTCGTCGTTCAGTTAAAAATGGCAGAAATTGAAAATATTGAGGGAAATGAGACGC
TATTTTATGAAAAAATAACCTGTTTGTATAAAGAAATAATGGCCTACAAAACGACTAATATAAGCTTTAACAACAACGAT
TACCTAGTTATAACAGAACTGATGGTTATTTTTGCGGAAAAAGGTTTTGTTGAAGAAGCAACTTCATTAATGGGGCTGAT
GAATACAGTAGTTGAGCGAGTACAAGAACTGAATTACTTTATGGAATACACCGAAATATTGCTTTTATATCAACAGGATG
AGCAAGTAAGTTATGAAAAGAAAATGATACAATTACTGAAAAAAATTAACGCATCAAATGATCCAGCATTAATTGAACGA
GTGAAAAAGCATGCAAGTAAACATTTCGCCAAATCAACGAAATATAAAATGGCATACGATATTTTGTCTTAA

Upstream 100 bases:

>100_bases
ATAAAAATGAAAGCAAAAAAGTAGCTGGAAAAAGTAGTTGTTTTCCATTTCGAAATGTTTATAATTAAGAGGAAAATATT
GAAAAAACGGCGGTGACATC

Downstream 100 bases:

>100_bases
TATTAGAAACAGCTAGTTGTTATACTGGCTGTTTTCTTTTGCTTTTTTGCGGGTAATTAAAGGTGTTAGGTTTAGGGCGA
AAAAGGGGGAGAAAGCATGC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASLETLIHIARRLEIPEEVLLMSEDEENRALLKELDEIF
KLLVCSNPKEIESRLKKIAENVELQHESPAVELSFYCLQVAFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYY
YGQAVKHSHATCNYQLAVEYWEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHIQQAWDLIKDEEQERFVSILYFY
GYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYFVVQLKMAEIENIEGNETLFYEKITCLYKEIMAYKTTNISFNNND
YLVITELMVIFAEKGFVEEATSLMGLMNTVVERVQELNYFMEYTEILLLYQQDEQVSYEKKMIQLLKKINASNDPALIER
VKKHASKHFAKSTKYKMAYDILS

Sequences:

>Translated_423_residues
MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASLETLIHIARRLEIPEEVLLMSEDEENRALLKELDEIF
KLLVCSNPKEIESRLKKIAENVELQHESPAVELSFYCLQVAFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYY
YGQAVKHSHATCNYQLAVEYWEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHIQQAWDLIKDEEQERFVSILYFY
GYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYFVVQLKMAEIENIEGNETLFYEKITCLYKEIMAYKTTNISFNNND
YLVITELMVIFAEKGFVEEATSLMGLMNTVVERVQELNYFMEYTEILLLYQQDEQVSYEKKMIQLLKKINASNDPALIER
VKKHASKHFAKSTKYKMAYDILS
>Mature_423_residues
MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASLETLIHIARRLEIPEEVLLMSEDEENRALLKELDEIF
KLLVCSNPKEIESRLKKIAENVELQHESPAVELSFYCLQVAFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYY
YGQAVKHSHATCNYQLAVEYWEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHIQQAWDLIKDEEQERFVSILYFY
GYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYFVVQLKMAEIENIEGNETLFYEKITCLYKEIMAYKTTNISFNNND
YLVITELMVIFAEKGFVEEATSLMGLMNTVVERVQELNYFMEYTEILLLYQQDEQVSYEKKMIQLLKKINASNDPALIER
VKKHASKHFAKSTKYKMAYDILS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49793; Mature: 49793

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASLETLIHIARRLEIPEEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHH
LLMSEDEENRALLKELDEIFKLLVCSNPKEIESRLKKIAENVELQHESPAVELSFYCLQV
HEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYYYGQAVKHSHATCNYQLAVEY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHH
WEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHIQQAWDLIKDEEQERFVSILYFY
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYFVVQLKMAEIENIEGNETLFYEKIT
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEHHEEEHHHHHHCCCCCCCCHHHHHHH
CLYKEIMAYKTTNISFNNNDYLVITELMVIFAEKGFVEEATSLMGLMNTVVERVQELNYF
HHHHHHHHHHCCCEEECCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MEYTEILLLYQQDEQVSYEKKMIQLLKKINASNDPALIERVKKHASKHFAKSTKYKMAYD
HHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
ILS
HCC
>Mature Secondary Structure
MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASLETLIHIARRLEIPEEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHH
LLMSEDEENRALLKELDEIFKLLVCSNPKEIESRLKKIAENVELQHESPAVELSFYCLQV
HEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYYYGQAVKHSHATCNYQLAVEY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHH
WEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHIQQAWDLIKDEEQERFVSILYFY
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYFVVQLKMAEIENIEGNETLFYEKIT
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEHHEEEHHHHHHCCCCCCCCHHHHHHH
CLYKEIMAYKTTNISFNNNDYLVITELMVIFAEKGFVEEATSLMGLMNTVVERVQELNYF
HHHHHHHHHHCCCEEECCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MEYTEILLLYQQDEQVSYEKKMIQLLKKINASNDPALIERVKKHASKHFAKSTKYKMAYD
HHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
ILS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA