| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224685
Identifier: 226224685
GI number: 226224685
Start: 2157577
End: 2158719
Strand: Reverse
Name: 226224685
Synonym: Lm4b_02100
Alternate gene names: NA
Gene position: 2158719-2157577 (Counterclockwise)
Preceding gene: 226224686
Following gene: 226224684
Centisome position: 74.11
GC content: 33.25
Gene sequence:
>1143_bases ATGAAAAAAGGGATTTTATTATCAATTTTGTTAGCTTTAGTATTAGTAATTAGCGCTTGTGGGGAAAGCGCGGAAGAAAA AGCAGCAAAAACACCACAAGGTAAATTTGTTCAAACAATGAAAAATGGGATGAATGTACCTGATCAATCTACATATACAA CTTCATTTGCTGTAAATGATATCAATGTTTCAAGCACCGACCCAAGTGCTCAAACGAGGGGGATTTTAAAAGACATTAAG CTTTCTGTAACAACATCAACTGACAAGAAAGCAAACAAATCAGAAGCAAAATTCAATGTAACATCAACGAATAACTTACT ACCAATTTCAATGGATTTAGATTTTTTAGTAGATAGTAAAACGGGAAATGCCTATGTTCCACTTAAAACCATTGTAGAGC CAGATGCTTCTTTACTTAGTTATTTAGATCAAGCGACTGGTGGTATGTGGTCTAAAATTAACACCGACTACCCTGATCTA AAAAATAAATATCTTAGTACTGAAGAATTAACCAGTTCATTAACAGATCAACCAGAGGCAAAAACAGCTGTAGATACGAA AGAAATTGAAGCAGCGACGAAAGATTTAAACAAAAAAGCGATAAAATTAGTTGATACTTATTTCACGGGCTTAGAAAAAG ATCGTTTTAAAGAAGCGGATGATGGTACTGTTAGCGTTACGATTAAAAACGCCGATATCGCGAACTTGATGAACCAAGTA GCTAAATTAATGGATGATGAAAAAGTAAAAGCAGATCTTAAAGTTATTGCAGAAAGCCAAGGTTCAGATGCAGTAACAGA TTTTGATTCCACGTATACAGAAATGAAATCGAGTTTAACAGATGCTGCGAAAGAATTAAAAGAAAATAAAACGTACTTAA TTAATAATAAACTTACTGTAAAATCAGGAAAAGAGAACAGCTTAGATACACTTACTCTTCAAACAAAAATAGAAGATAAA TCTGATGCGAGCGCTCCTGAGTCTATTAGCTTTACGGTGAAAACAAAAGCAGAAGAATTTGTTCCAATTGAAGATTTTCC TACAAAAGATGAAGTTATTTCTAGCGAAGAGCTAAATAAAATCATCACAGATGTAACAGCAAAAATGTATGGCGGAATGG ATATAAGTGGAACTAATTATTAA
Upstream 100 bases:
>100_bases ATAGGAATTTGTGTCAGACTAATGAACTATTGTAAATTCTCTTGTTTTCAGACCTTAAAGTGTGTTAATTTTAATGTATT AATCACCTAGGAGGAGAATC
Downstream 100 bases:
>100_bases TCAATCGAAAGACGCAGCGACTTAGGTCGTTGCGTTTTTTTGATTTTTATTTTGGCGCGGCTTTGTGGTATGATATGTAG AGAAAATGATGGACGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNGMNVPDQSTYTTSFAVNDINVSSTDPSAQTRGILKDIK LSVTTSTDKKANKSEAKFNVTSTNNLLPISMDLDFLVDSKTGNAYVPLKTIVEPDASLLSYLDQATGGMWSKINTDYPDL KNKYLSTEELTSSLTDQPEAKTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFKEADDGTVSVTIKNADIANLMNQV AKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEMKSSLTDAAKELKENKTYLINNKLTVKSGKENSLDTLTLQTKIEDK SDASAPESISFTVKTKAEEFVPIEDFPTKDEVISSEELNKIITDVTAKMYGGMDISGTNY
Sequences:
>Translated_380_residues MKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNGMNVPDQSTYTTSFAVNDINVSSTDPSAQTRGILKDIK LSVTTSTDKKANKSEAKFNVTSTNNLLPISMDLDFLVDSKTGNAYVPLKTIVEPDASLLSYLDQATGGMWSKINTDYPDL KNKYLSTEELTSSLTDQPEAKTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFKEADDGTVSVTIKNADIANLMNQV AKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEMKSSLTDAAKELKENKTYLINNKLTVKSGKENSLDTLTLQTKIEDK SDASAPESISFTVKTKAEEFVPIEDFPTKDEVISSEELNKIITDVTAKMYGGMDISGTNY >Mature_380_residues MKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNGMNVPDQSTYTTSFAVNDINVSSTDPSAQTRGILKDIK LSVTTSTDKKANKSEAKFNVTSTNNLLPISMDLDFLVDSKTGNAYVPLKTIVEPDASLLSYLDQATGGMWSKINTDYPDL KNKYLSTEELTSSLTDQPEAKTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFKEADDGTVSVTIKNADIANLMNQV AKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEMKSSLTDAAKELKENKTYLINNKLTVKSGKENSLDTLTLQTKIEDK SDASAPESISFTVKTKAEEFVPIEDFPTKDEVISSEELNKIITDVTAKMYGGMDISGTNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41460; Mature: 41460
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNGMNVPDQSTYTTSFAVND CCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEE INVSSTDPSAQTRGILKDIKLSVTTSTDKKANKSEAKFNVTSTNNLLPISMDLDFLVDSK EECCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCEEEEECC TGNAYVPLKTIVEPDASLLSYLDQATGGMWSKINTDYPDLKNKYLSTEELTSSLTDQPEA CCCEEECHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCC KTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFKEADDGTVSVTIKNADIANLMNQV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCHHHHHHHHH AKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEMKSSLTDAAKELKENKTYLINNKLTV HHHHCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEE KSGKENSLDTLTLQTKIEDKSDASAPESISFTVKTKAEEFVPIEDFPTKDEVISSEELNK ECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHCHHHHHH IITDVTAKMYGGMDISGTNY HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNGMNVPDQSTYTTSFAVND CCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEE INVSSTDPSAQTRGILKDIKLSVTTSTDKKANKSEAKFNVTSTNNLLPISMDLDFLVDSK EECCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCEEEEECC TGNAYVPLKTIVEPDASLLSYLDQATGGMWSKINTDYPDLKNKYLSTEELTSSLTDQPEA CCCEEECHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCC KTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFKEADDGTVSVTIKNADIANLMNQV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCHHHHHHHHH AKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEMKSSLTDAAKELKENKTYLINNKLTV HHHHCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEE KSGKENSLDTLTLQTKIEDKSDASAPESISFTVKTKAEEFVPIEDFPTKDEVISSEELNK ECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHCHHHHHH IITDVTAKMYGGMDISGTNY HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA