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The map label for this gene is ylbL [H]

Identifier: 226224657

GI number: 226224657

Start: 2134330

End: 2135370

Strand: Reverse

Name: ylbL [H]

Synonym: Lm4b_02072

Alternate gene names: 226224657

Gene position: 2135370-2134330 (Counterclockwise)

Preceding gene: 226224658

Following gene: 226224654

Centisome position: 73.31

GC content: 38.42

Gene sequence:

>1041_bases
ATGCGTAAAGAGTGGAAAAAAATAACGGCGATAGTGCTGTTAATTATTATTATAGCGGGCTTTTTTATTCCAGTTCCGTA
TTATATTTCAAAACCTGGTGGTACGGAAGAACTTGCTCCACTCGTTACAGTTGATGACCATCCAAATAAAAAAGACGGTT
CGCTCAGTCTAGTGACGATTGCAATGGGAAAAGCGAATATTTATACATATATGACCGCTAAATTTTTGCCATATCATGAG
TTAGAAAAAGATAGCGATATCAAATACGAGAATGAAAGCGACGAAGAATATAACGTTCGCCAAATGCAAATGATGAACGA
ATCCAAAAATAATGCCATTCAAGTGGCTTATAAAGCAGCCGGTCAAGAAGTCAAAGTCACTTATGATGGCGTATACGTAT
TAAGCGTAAAAGATGACGTTCCAGCAGCCGATGTCCTTCACGCTGGCGACCTAATCACAGAAATTGATGGGAATGCGTTT
AAATCAAGCCAAGAATTTATTGATTATATTCACAGTAAAAAAGTGGGAGACACAGTCAAAATAAACTACAAACACGGCGA
CAAAAATGAGCAAGCCAACATCAAATTAACAGCAATTGATAAAAAAGGCACTCCAGGAATCGGTATCACGCTTGTGGATG
ATGAAAAAATCACCGCAGATCCAACTGTGAAAATCGACTCAGAAAAAATCGGTGGACCTTCTGCCGGTTTAATGTTCAGT
TTAGAAATTTACAGCCGTTTCCAAAAAAATGATCTTACAGATGGCAAAAAAATCGCCGGAACTGGTACGATTGACCCTGA
CGGAACTGTTGGTAGAATCGGCGGAATTGATCAAAAGGTCGTTGCCGCAGATAAAAGCGGTGCGAAGGTTTTCTTTGCTC
CCAATGATCCAATTACCGATGAAATGAAAAAAAGCGACCCAAGTATCGAAAGTAATTACGATACAGCAGTTAAAACAGCA
AAAGACATTGACTCCAAAATGAAAATCGTTCCAGTTAAAACTTTCCAAGATGCTGTGGATTATTTAGAAAAACTACAATA
A

Upstream 100 bases:

>100_bases
AGAAGTGGCGCAGTATCAAGGTGATATCAGCGAACTTGTTCCTGAAATAGTGAACGAACAAGTACAAGCAAAATTTAAGT
AAGTGGGAGATGGACAGAAA

Downstream 100 bases:

>100_bases
AAAAAGCCATTTTGTCTGCTATAGACAAAACGGCTTTTTTCATTAAAGATATTTGGCAGTTAATGATTGTTTATTTTCAA
GTAAATCAAGGGGAGCGCCT

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDDHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHE
LEKDSDIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAF
KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFS
LEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKVFFAPNDPITDEMKKSDPSIESNYDTAVKTA
KDIDSKMKIVPVKTFQDAVDYLEKLQ

Sequences:

>Translated_346_residues
MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDDHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHE
LEKDSDIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAF
KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFS
LEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKVFFAPNDPITDEMKKSDPSIESNYDTAVKTA
KDIDSKMKIVPVKTFQDAVDYLEKLQ
>Mature_346_residues
MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDDHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHE
LEKDSDIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAF
KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFS
LEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKVFFAPNDPITDEMKKSDPSIESNYDTAVKTA
KDIDSKMKIVPVKTFQDAVDYLEKLQ

Specific function: Unknown

COG id: COG3480

COG function: function code T; Predicted secreted protein containing a PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF00595 PDZ [H]

EC number: NA

Molecular weight: Translated: 38075; Mature: 38075

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDDHPNKKDGSLSLVTI
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCEEEEECCCCCCCCCCEEEEEE
AMGKANIYTYMTAKFLPYHELEKDSDIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAA
EECCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECC
GQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVK
CCEEEEEECCEEEEEECCCCCHHHHHHCCCEEEECCCCHHCCHHHHHHHHHCCCCCCEEE
INYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFS
EEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHCCCCCCCEEEE
LEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKVFFAPNDPITD
EHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCCEEEEECCCCCEEEECCCCCCCH
EMKKSDPSIESNYDTAVKTAKDIDSKMKIVPVKTFQDAVDYLEKLQ
HHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDDHPNKKDGSLSLVTI
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCEEEEECCCCCCCCCCEEEEEE
AMGKANIYTYMTAKFLPYHELEKDSDIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAA
EECCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECC
GQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVK
CCEEEEEECCEEEEEECCCCCHHHHHHCCCEEEECCCCHHCCHHHHHHHHHCCCCCCEEE
INYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFS
EEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHCCCCCCCEEEE
LEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKVFFAPNDPITD
EHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCCEEEEECCCCCEEEECCCCCCCH
EMKKSDPSIESNYDTAVKTAKDIDSKMKIVPVKTFQDAVDYLEKLQ
HHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]