Click here to switch to the map view.

The map label for this gene is 226224633

Identifier: 226224633

GI number: 226224633

Start: 2107873

End: 2108466

Strand: Reverse

Name: 226224633

Synonym: Lm4b_02048

Alternate gene names: NA

Gene position: 2108466-2107873 (Counterclockwise)

Preceding gene: 226224634

Following gene: 226224632

Centisome position: 72.39

GC content: 36.2

Gene sequence:

>594_bases
ATGCCAAAACTCGTTACGGGATATGAGCGTCAACAAACTAAAAACCTAATTATCGAACATACAAGCCATTTAATTTATAT
AAAAAAAGGAATTCAAGGTTTTACTGTGGAGGATATTACTCGAGCAGCTAGGATTGGAAAGAGAAAATTCTATACGTGTT
TTCCCTCCAAAGAAGCATGCCTATTTGAGGTTGTGGAATATTCCTATCAAGCACAATTAGAGGCATTTAAAAAAATTATG
GAGGAGAAAGGTTCGTTAAAAAGCAAGATGACTCGTTTTTTGAAAGAAGTCTATCTTTCGGAAAAGAGTATAAACAACTA
CTTTTCACCGGAAGATTTCCACGCAATACTCCAAAAACTCCCTCCAACATATACGGAAAGAGAAGAAAGAATGACAAGTG
AAGTCCTGGAAACTGCCATGACGTATATCGATCTTACGAGAGCTCAATGGGAGGCTTTAGTGATGTTACTAGATTGTTTA
ACTTACACTGCGACAAGGAGTTATGTAGAAACTGCCAAAAAAGCGAAAGAAGAGACTTTGGATATATTAATACATTCTAT
AGCTGATTATGTAGAAAAACAGACCCAGTGCTAA

Upstream 100 bases:

>100_bases
CATTGTTAAATATTTAGTTTAAGGTGTTTTTGTAGAACTGGAAATTAATAAATAGTTCCATTAAAAGCGATATGCAAGAA
ATTTTTCAAGGAGGAGCAAA

Downstream 100 bases:

>100_bases
CGAAAAATATTTTAGGAGGGTAAATAAATGAATAAAGAAACCGAACGAAAGCTTGCTGCGTCACTCACTTCTCAATCAAT
AGAAATATTACCGTTTATTC

Product: hypothetical transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAARIGKRKFYTCFPSKEACLFEVVEYSYQAQLEAFKKIM
EEKGSLKSKMTRFLKEVYLSEKSINNYFSPEDFHAILQKLPPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCL
TYTATRSYVETAKKAKEETLDILIHSIADYVEKQTQC

Sequences:

>Translated_197_residues
MPKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAARIGKRKFYTCFPSKEACLFEVVEYSYQAQLEAFKKIM
EEKGSLKSKMTRFLKEVYLSEKSINNYFSPEDFHAILQKLPPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCL
TYTATRSYVETAKKAKEETLDILIHSIADYVEKQTQC
>Mature_196_residues
PKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAARIGKRKFYTCFPSKEACLFEVVEYSYQAQLEAFKKIME
EKGSLKSKMTRFLKEVYLSEKSINNYFSPEDFHAILQKLPPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCLT
YTATRSYVETAKKAKEETLDILIHSIADYVEKQTQC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23043; Mature: 22912

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAARIGKRKFYTCFPSKEAC
CCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHEEECCCCHHH
LFEVVEYSYQAQLEAFKKIMEEKGSLKSKMTRFLKEVYLSEKSINNYFSPEDFHAILQKL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
PPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCLTYTATRSYVETAKKAKEETL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILIHSIADYVEKQTQC
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAARIGKRKFYTCFPSKEAC
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHEEECCCCHHH
LFEVVEYSYQAQLEAFKKIMEEKGSLKSKMTRFLKEVYLSEKSINNYFSPEDFHAILQKL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
PPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCLTYTATRSYVETAKKAKEETL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILIHSIADYVEKQTQC
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA