| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is mngB [H]
Identifier: 226224611
GI number: 226224611
Start: 2077534
End: 2080191
Strand: Reverse
Name: mngB [H]
Synonym: Lm4b_02026
Alternate gene names: 226224611
Gene position: 2080191-2077534 (Counterclockwise)
Preceding gene: 226224613
Following gene: 226224610
Centisome position: 71.42
GC content: 41.23
Gene sequence:
>2658_bases ATGACTAGAAAGAAAGCGCATATTATTTCTCATTCTCATTGGGATAGAGAATGGTTTTTACCACTGGAAAGTTTGAGATT TAGGCTCGTTACACTTATGGACGAAGTAGAAGCATTACTTGATAAGGAAGATGGATTTCATCATTTTCATATGGATGGGC AAATGATTATGTTAGAAGATTATTTGGCTGTGAAACCCGCTAAAAGAGAAAAAATGAAGCAGCTGGTTGCGGACGGAAAA CTGCGAATCGGACCGTGGTACATGTTGCAAGATGCTTTTTTGACAAGTGGAGAAGCGAATATTCGTAATTTGCAGTATGG TCTAGAAATGGCAGAAGAATTCGGTCAAGTAGAGAAAATTGGTTATTTTCCTGATACGTTTGGTTTATATGGCCAAGTGC CACAACTCATGCGCCAAGCTGGTTTTGATACGGTCGTTTTCGGTCGTGGAGTCAATCCAACCGGCTTTAACAACCAAGTT TTTGATAGCGCTTTTGCCTCGAAATATTCGGAGATGTTTTGGGAAAGCCCGGACGGTTCGAAAGTCTTAGGGATTTTACT CGCAAATTGGTATTCCAATGGCAATGAAATTCCGGTGGATAAAGAAGCCGCAAAAGTTTTCTGGGATAAGAAATTAGCGG ATGTGGAACGGTTCGCATCGACGGATGAATGGTTATTTATGAACGGCTGTGATCATCAGCCAGTGCAAACTGATTTAGCG GAAGCATTGGAAGTGGCACGGGAACTTTATCCTGAGGTGGAGTTTATCCATAGCCATTTTGAAAAATATCAAGAGGCTGT CAAAGCTGGTCTTGCTCCTGAAAAATTACAAACGGTTCACGGAGAATTAACGAGCCAACAATCAGATGGATGGTCTACAC TCGCCAACACAGCATCTTCACGTATTTACTTAAAACAAGCAAATGCGAAAATAGAGCGTTTATTAGAGCGTTTGGCTGAA CCGATTTCCGTGATGGCGACAGAAGCCGGTGTCCAGTATCCACATGAATACTTAGCTTATGCTTGGAAATTACTTATGGA AAATCAAATCCATGATAGTATCACGGGATGTAGTTTGGATGAGGTGCACCGTGAAATGGAAGCTCGTTTTGAAAAAGTCG AACAGGCGACTATGGCAATTATTCAAAACGCCGCGCGTCAAATCACGGAACAAATTACAACGAATGAAGCGGGCATTCCT ATTACGGTATTTCATGCAGGTGGCCTTGAAGCAACGAGATCCATAGAACTCGAACTTGAAACAGATGCAATTCATTTTTC TGAGATGCATTTTGAATTAATACCAGACGAATTAGCGAAACTTCCAGAGCAAAGTTTTCGATTAGAAACAAGTACTGGCG AGGAAATTCCGGTTGTTGTTGAGTCGCTTGGCATTCGTTTTAATTACGATTTACCAGAACGGAAATTCCGTGATTCTTAT TTTGCGAGAAAGTACAAACTAACCTTTGCCGTGGAAAATTTACCAGCGGTTGGTTATGAAACAATTTACGCGCATCCGGT TGATTTGGTGAATGAATCAGCGAACCAAACACAAGATTTCTTTTTAGAAAATCGCTTTTTAAAAGTGGAAGTTGCGGCGA ATGGGACGTATACGATTTTAGATAAAGAAAAAGCGATAGAAATTGCAGGTGTTGGGGCATATGAGGATGCGGGCGACATC GGTAATGAATATATGTTTAAAGAAACCGGCGATAACTTGCGAATAAATACACTCCATTCCAAACCGGCAATTCGAGTACT ACGAGAGGATAAACTCGGCAAAACAATCGAAATAAACCATGAAATTGAAATACCAGAAAGCGCAAGTTCCGCCTTTGCGG AAGAAAAACGTCGCCTAGTATGGCATCCTGACCGGCAGTCGGAGCGCTCGGAAAATTTTACTACATTTAAAATCACGACA GAATTAACGCTAAATAAACACGATAAACAATTAACTATCCGCGTGAAACTAAATAACAACGTAGATGACCATCGACTCCG CGTGCTTTTCCCGACTGGAAAACAAACAGAAACACATCAAGTGGGAAGTGTTTTTGAAGTAGTAACACGCGCGAATAAAC AAGTCAAAGAATGGACAAATCCTGCTAAAGATAACCGAAAACAAGGCTTTGTTGCTAGTGGAAATATCGTTGTCGCAAGT GTTGGTTTACCAGAATATGAAGTAAGCGAACATGGTGACAAACTAGAATTAACGTTGCTTCGCGCAGTATCTGAAATAGG CGATTGGGGTGACTTCCCGGCATATGAAGCGGAATGCCACCGAGAGATTACAGCAGAGTTTCACGTTTTCCTAACAGATG ATTCTGATGTTGCAAATAGCACCATCCCAGCACAAGTAAACGCATGCTTGACTCCTATTTTTGCATTCCAACACAAATCA GCAACGAAAGAAAAAATTCTCGCAGAAAAAAGAGATTTTGCAGAATGGAAAACAGAGGATGGATTTGTCTTCTCAGCATT TAAACTCGCTAAAGACAACCAACCGATTATCCGATTCTTCCAAACCGCAAGTGAACCAAAACAGCTACAGACGATGCAAC CGTGGCAGAAATCGACTATTTTGGAAGAAACGACGGGAGATGCCAAGAAACAATTTACCGCTAGTCCAAACGAAATCATC ACTTTAAAAGGAGTGTAA
Upstream 100 bases:
>100_bases GATTATTCATAGTAGTTTTTCACCTAGCATTGCAATTCACTTTAGCCCTTACTATACTTAGCTTGAAAGCGAATACAAAA AGGATATTTGGAGGGGCAAA
Downstream 100 bases:
>100_bases TAGATGACAAACAAAGTACCAGCAAGCTTTAACAAATGGATAGAGAAAGTGAAAATGACTTTTCCAGAAAACGAAAAACT TCACCGCATGTTTGAAAAAT
Product: sugar hydrolases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 885; Mature: 884
Protein sequence:
>885_residues MTRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKEDGFHHFHMDGQMIMLEDYLAVKPAKREKMKQLVADGK LRIGPWYMLQDAFLTSGEANIRNLQYGLEMAEEFGQVEKIGYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQV FDSAFASKYSEMFWESPDGSKVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERFASTDEWLFMNGCDHQPVQTDLA EALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKLQTVHGELTSQQSDGWSTLANTASSRIYLKQANAKIERLLERLAE PISVMATEAGVQYPHEYLAYAWKLLMENQIHDSITGCSLDEVHREMEARFEKVEQATMAIIQNAARQITEQITTNEAGIP ITVFHAGGLEATRSIELELETDAIHFSEMHFELIPDELAKLPEQSFRLETSTGEEIPVVVESLGIRFNYDLPERKFRDSY FARKYKLTFAVENLPAVGYETIYAHPVDLVNESANQTQDFFLENRFLKVEVAANGTYTILDKEKAIEIAGVGAYEDAGDI GNEYMFKETGDNLRINTLHSKPAIRVLREDKLGKTIEINHEIEIPESASSAFAEEKRRLVWHPDRQSERSENFTTFKITT ELTLNKHDKQLTIRVKLNNNVDDHRLRVLFPTGKQTETHQVGSVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVAS VGLPEYEVSEHGDKLELTLLRAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANSTIPAQVNACLTPIFAFQHKS ATKEKILAEKRDFAEWKTEDGFVFSAFKLAKDNQPIIRFFQTASEPKQLQTMQPWQKSTILEETTGDAKKQFTASPNEII TLKGV
Sequences:
>Translated_885_residues MTRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKEDGFHHFHMDGQMIMLEDYLAVKPAKREKMKQLVADGK LRIGPWYMLQDAFLTSGEANIRNLQYGLEMAEEFGQVEKIGYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQV FDSAFASKYSEMFWESPDGSKVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERFASTDEWLFMNGCDHQPVQTDLA EALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKLQTVHGELTSQQSDGWSTLANTASSRIYLKQANAKIERLLERLAE PISVMATEAGVQYPHEYLAYAWKLLMENQIHDSITGCSLDEVHREMEARFEKVEQATMAIIQNAARQITEQITTNEAGIP ITVFHAGGLEATRSIELELETDAIHFSEMHFELIPDELAKLPEQSFRLETSTGEEIPVVVESLGIRFNYDLPERKFRDSY FARKYKLTFAVENLPAVGYETIYAHPVDLVNESANQTQDFFLENRFLKVEVAANGTYTILDKEKAIEIAGVGAYEDAGDI GNEYMFKETGDNLRINTLHSKPAIRVLREDKLGKTIEINHEIEIPESASSAFAEEKRRLVWHPDRQSERSENFTTFKITT ELTLNKHDKQLTIRVKLNNNVDDHRLRVLFPTGKQTETHQVGSVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVAS VGLPEYEVSEHGDKLELTLLRAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANSTIPAQVNACLTPIFAFQHKS ATKEKILAEKRDFAEWKTEDGFVFSAFKLAKDNQPIIRFFQTASEPKQLQTMQPWQKSTILEETTGDAKKQFTASPNEII TLKGV >Mature_884_residues TRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKEDGFHHFHMDGQMIMLEDYLAVKPAKREKMKQLVADGKL RIGPWYMLQDAFLTSGEANIRNLQYGLEMAEEFGQVEKIGYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQVF DSAFASKYSEMFWESPDGSKVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERFASTDEWLFMNGCDHQPVQTDLAE ALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKLQTVHGELTSQQSDGWSTLANTASSRIYLKQANAKIERLLERLAEP ISVMATEAGVQYPHEYLAYAWKLLMENQIHDSITGCSLDEVHREMEARFEKVEQATMAIIQNAARQITEQITTNEAGIPI TVFHAGGLEATRSIELELETDAIHFSEMHFELIPDELAKLPEQSFRLETSTGEEIPVVVESLGIRFNYDLPERKFRDSYF ARKYKLTFAVENLPAVGYETIYAHPVDLVNESANQTQDFFLENRFLKVEVAANGTYTILDKEKAIEIAGVGAYEDAGDIG NEYMFKETGDNLRINTLHSKPAIRVLREDKLGKTIEINHEIEIPESASSAFAEEKRRLVWHPDRQSERSENFTTFKITTE LTLNKHDKQLTIRVKLNNNVDDHRLRVLFPTGKQTETHQVGSVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVASV GLPEYEVSEHGDKLELTLLRAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANSTIPAQVNACLTPIFAFQHKSA TKEKILAEKRDFAEWKTEDGFVFSAFKLAKDNQPIIRFFQTASEPKQLQTMQPWQKSTILEETTGDAKKQFTASPNEIIT LKGV
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=768, Percent_Identity=28.3854166666667, Blast_Score=311, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 100757; Mature: 100625
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKEDGFHHFHMDGQMIMLED CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEC YLAVKPAKREKMKQLVADGKLRIGPWYMLQDAFLTSGEANIRNLQYGLEMAEEFGQVEKI HHHCCCHHHHHHHHHHHCCCEEECCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCC GYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQVFDSAFASKYSEMFWESPDGS CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC KVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERFASTDEWLFMNGCDHQPVQTDLA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH EALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKLQTVHGELTSQQSDGWSTLANTASS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC RIYLKQANAKIERLLERLAEPISVMATEAGVQYPHEYLAYAWKLLMENQIHDSITGCSLD EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EVHREMEARFEKVEQATMAIIQNAARQITEQITTNEAGIPITVFHAGGLEATRSIELELE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEE TDAIHFSEMHFELIPDELAKLPEQSFRLETSTGEEIPVVVESLGIRFNYDLPERKFRDSY CCEEEEEHHHHEECCHHHHHCCHHHEEEECCCCCCCCHHHHHCCCEEECCCCHHHHHHHH FARKYKLTFAVENLPAVGYETIYAHPVDLVNESANQTQDFFLENRFLKVEVAANGTYTIL HHEEEEEEEEECCCCCCCCHHEEECCHHHHCCCCCHHHHHHHCCCEEEEEEECCCEEEEE DKEKAIEIAGVGAYEDAGDIGNEYMFKETGDNLRINTLHSKPAIRVLREDKLGKTIEINH ECCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHCCCCCEEEECE EIEIPESASSAFAEEKRRLVWHPDRQSERSENFTTFKITTELTLNKHDKQLTIRVKLNNN EEECCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCC VDDHRLRVLFPTGKQTETHQVGSVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVAS CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEE VGLPEYEVSEHGDKLELTLLRAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANS CCCCCCCHHCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEEEECCCCCCCC TIPAQVNACLTPIFAFQHKSATKEKILAEKRDFAEWKTEDGFVFSAFKLAKDNQPIIRFF CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH QTASEPKQLQTMQPWQKSTILEETTGDAKKQFTASPNEIITLKGV HHCCCCHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCEEEEECC >Mature Secondary Structure TRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKEDGFHHFHMDGQMIMLED CCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEC YLAVKPAKREKMKQLVADGKLRIGPWYMLQDAFLTSGEANIRNLQYGLEMAEEFGQVEKI HHHCCCHHHHHHHHHHHCCCEEECCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCC GYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQVFDSAFASKYSEMFWESPDGS CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC KVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERFASTDEWLFMNGCDHQPVQTDLA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH EALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKLQTVHGELTSQQSDGWSTLANTASS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC RIYLKQANAKIERLLERLAEPISVMATEAGVQYPHEYLAYAWKLLMENQIHDSITGCSLD EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EVHREMEARFEKVEQATMAIIQNAARQITEQITTNEAGIPITVFHAGGLEATRSIELELE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEE TDAIHFSEMHFELIPDELAKLPEQSFRLETSTGEEIPVVVESLGIRFNYDLPERKFRDSY CCEEEEEHHHHEECCHHHHHCCHHHEEEECCCCCCCCHHHHHCCCEEECCCCHHHHHHHH FARKYKLTFAVENLPAVGYETIYAHPVDLVNESANQTQDFFLENRFLKVEVAANGTYTIL HHEEEEEEEEECCCCCCCCHHEEECCHHHHCCCCCHHHHHHHCCCEEEEEEECCCEEEEE DKEKAIEIAGVGAYEDAGDIGNEYMFKETGDNLRINTLHSKPAIRVLREDKLGKTIEINH ECCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHCCCCCEEEECE EIEIPESASSAFAEEKRRLVWHPDRQSERSENFTTFKITTELTLNKHDKQLTIRVKLNNN EEECCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCC VDDHRLRVLFPTGKQTETHQVGSVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVAS CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEE VGLPEYEVSEHGDKLELTLLRAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANS CCCCCCCHHCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEEEECCCCCCCC TIPAQVNACLTPIFAFQHKSATKEKILAEKRDFAEWKTEDGFVFSAFKLAKDNQPIIRFF CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH QTASEPKQLQTMQPWQKSTILEETTGDAKKQFTASPNEIITLKGV HHCCCCHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]