| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yteU [H]
Identifier: 226224609
GI number: 226224609
Start: 2075554
End: 2076165
Strand: Reverse
Name: yteU [H]
Synonym: Lm4b_02024
Alternate gene names: 226224609
Gene position: 2076165-2075554 (Counterclockwise)
Preceding gene: 226224610
Following gene: 226224608
Centisome position: 71.28
GC content: 38.89
Gene sequence:
>612_bases ATGAAACTTATTGATAAATTTTCAGTTATTAGCGACTGGATTATCCGGCTCGTCTGGACAAATTTAGTATGGCTTTTCCT CGTATTGATCGGCGGGATTGTGCTTGGCTTTATGCCGGCAACGGTTGCTTTATTTACGATAACGAGAAAATGGGCGCGGG GCGATTTAGATGTACCAGTTTGGAAATCTGCTTGGCAAACTTATAAACAGGTGTTTGTTTCGGCTAATTTAGCGGGTGCA GTTTTTGCGCTGATAGGGATTTTCCTGTATGCGGATTTGCGGATTGTTTTTGAATTAATGCAAGGTTTTTGGTCGACGAT TTTATACTTCTTCTTAATGTTCTTGCTTTTTCTCGTGGGAATTGCGTTTTTGCAGTATTTCACAGTGTTTGTCCACTTCC AAATGAAAAATGTGCGCGCTTATGTCGGGCAAGCGTTCTTGCTCGCGATTACTAGCTTTAAAAATACTTTTATGATTGTG GTTGGTCTTGTTTTTTGCGCATGGTTAATTTCGAAAATGCCTGCTTTTATTTTGTTTATTTCTGGTGTTTTACCAAGTTA TTGGATAATGAAAATCAATTTACACCGCTTCAAGCAAATGGAGCCTAAGTAA
Upstream 100 bases:
>100_bases GTGCGGTGTGTACGTAAAAGGCAGCCCATTAAGTAAATAAAAAAAGAAAAGTCTGGGCGAAAACTCAGGCTTTCTCTTAC TATCAAAGGAGAGAAAAAGA
Downstream 100 bases:
>100_bases CCCCTTACATTATTGGTGATAGTATGCAATAATCAGAAAAGAAGAGGGGGCAGTGAATGAGCATGACACAAGAATTACCA CGCAAGCGCGTTTTCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVALFTITRKWARGDLDVPVWKSAWQTYKQVFVSANLAGA VFALIGIFLYADLRIVFELMQGFWSTILYFFLMFLLFLVGIAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIV VGLVFCAWLISKMPAFILFISGVLPSYWIMKINLHRFKQMEPK
Sequences:
>Translated_203_residues MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVALFTITRKWARGDLDVPVWKSAWQTYKQVFVSANLAGA VFALIGIFLYADLRIVFELMQGFWSTILYFFLMFLLFLVGIAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIV VGLVFCAWLISKMPAFILFISGVLPSYWIMKINLHRFKQMEPK >Mature_203_residues MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVALFTITRKWARGDLDVPVWKSAWQTYKQVFVSANLAGA VFALIGIFLYADLRIVFELMQGFWSTILYFFLMFLLFLVGIAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIV VGLVFCAWLISKMPAFILFISGVLPSYWIMKINLHRFKQMEPK
Specific function: Unknown
COG id: COG5578
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006938 [H]
Pfam domain/function: PF04854 DUF624 [H]
EC number: NA
Molecular weight: Translated: 23572; Mature: 23572
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVALFTITRKWARGDLDVPV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WKSAWQTYKQVFVSANLAGAVFALIGIFLYADLRIVFELMQGFWSTILYFFLMFLLFLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIVVGLVFCAWLISKMPAFILFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVLPSYWIMKINLHRFKQMEPK HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVALFTITRKWARGDLDVPV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WKSAWQTYKQVFVSANLAGAVFALIGIFLYADLRIVFELMQGFWSTILYFFLMFLLFLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIVVGLVFCAWLISKMPAFILFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVLPSYWIMKINLHRFKQMEPK HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]