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The map label for this gene is scpA

Identifier: 226224556

GI number: 226224556

Start: 2019555

End: 2020304

Strand: Reverse

Name: scpA

Synonym: Lm4b_01970

Alternate gene names: 226224556

Gene position: 2020304-2019555 (Counterclockwise)

Preceding gene: 226224557

Following gene: 226224555

Centisome position: 69.36

GC content: 35.73

Gene sequence:

>750_bases
ATGGTAGAAATGAATTTTAAAGTGGACGCGTTTGAAGGACCGCTTGACTTACTTCTTCATTTAATTGGACAACTAGAAGT
CGATATTTATGACATCCCTATGGCTGAAATTACGGACCAATACATGGAATTTGTTCATACAATGCAAGAAATGGAATTAG
ATGTCGCGAGTGAATATTTAGTGATGGCAGCAACTTTACTAGCAATTAAAAGTAAGATGCTACTTCCAAAGCAAGAACTG
GAAATCGATTATGATACACTAGAAGAGGAAGAGGATCCTCGTGATGCTTTAGTCGAAAAACTAATGGAATACAAACGATT
CAAAGAAGCCGCAAAAGAATTAAAAGAAAAAGAGGCGGAACGGAGCTTTTATTTCAGTAAACCTCCAATGGATTTAGCAG
AATATGATGATGGTACTAAGGTGGCAGAACTGGACGTATCATTAAACGATATGCTAAGTGCTTTTAACAAAATGCTACGT
CGGAAAAAGTTAAATAAACCTCTCCATACAAGAATTACAACACAAGAAATCTCCATTGATCAAAGAATGGATTCTGTTTT
AGAAAAATTAAATTTACAAGTCAATCATCGCTTGCGATTTGACGAGTTATTTGAAGAACAAACGAAAGAGCAACTTGTCG
TTACGTTTTTGGCTTTGTTAGAATTAATGAAGCGAAAATTGGTCGAAGTAGAACAAGCGGAAAGTTTTGCGGATTTATAT
GTGCAAGGTAAAGGGGAAGAAATATCGTGA

Upstream 100 bases:

>100_bases
TGTTTTTGTGGAAAACGGAGTCGATAAATTAATCGTTGCCCGCGAAACATATGAAAATTTAGTGCAAAATGATCTTTCAT
TATAGTAGGGCGGGACAGAT

Downstream 100 bases:

>100_bases
ACAGAGAAGAACAATTAGGCGTATTAGAGAGTTTGCTTTTTGCGGCGGGAGATGCGGGGCTTTCAACGGAACAATTAACT
GAAGTCATGGAAATTACGCA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQEL
EIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLR
RKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLY
VQGKGEEIS

Sequences:

>Translated_249_residues
MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQEL
EIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLR
RKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLY
VQGKGEEIS
>Mature_249_residues
MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQEL
EIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLR
RKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLY
VQGKGEEIS

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29157; Mature: 29157

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYL
CEEECEEEECCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAE
HHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISID
HCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHH
QRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLY
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGKGEEIS
EECCCCCCC
>Mature Secondary Structure
MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYL
CEEECEEEECCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAE
HHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISID
HCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHH
QRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLY
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGKGEEIS
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]