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The map label for this gene is ypmB [H]

Identifier: 226224502

GI number: 226224502

Start: 1959412

End: 1959996

Strand: Reverse

Name: ypmB [H]

Synonym: Lm4b_01915

Alternate gene names: 226224502

Gene position: 1959996-1959412 (Counterclockwise)

Preceding gene: 226224503

Following gene: 226224501

Centisome position: 67.29

GC content: 34.02

Gene sequence:

>585_bases
ATGTATCTATGCGAAAATGAAAATGCATATCGCCGGAGGAATTCCGGTAATTTAGAAATAGAAATGAGCGAGATTATTTT
GCGAAATAGAAAACCTAAGCGTAAGATTGGCAAATGGATAGCGATTATTCTCGGCATAATTATTGTGCTTGTCGTAGCAG
CTTTTCTGTACTTTAGATATGCAGAAAAACCAGTAACCAATGCAGAAACAGAAGCCTTAGACCGAATAAGTGGCCAAGTT
GATTTAAAAACAACAGATCAATTTTATCTATATAATGGGCCAAAAGAAGTGTATTACGTATTAACTGGTAAGAACAGTAA
GAATAAGAATATCATTGTTTGGGTTCCAAAGAAAAAATCCGACAAAGTATATGTTAAATTCGCATCTGATGGGATTACAG
AACAACAAGCACGCGATAAAGTCACAAAAGAAAAGAAACCAAAGAAAATTTTACATGTGAATTTAGGAATGGAAAAAGAA
ACGCCTATTTGGGAAGTTGCCTACTTAGATAAGAATGACAAGCTAAACTACTTTGACATTAACTTTGAAACAGGTGAATG
GTACAGAGAGATTGAAAACTTGTAA

Upstream 100 bases:

>100_bases
AAGGCAAACAGGCGGATTTATTAGAAGAAGTGAGTGAATTCTTTAAGGAAGGTTAAATTTTTCCTGATATGACTTCAAAT
CTTAGGCCGCTATTGCTATA

Downstream 100 bases:

>100_bases
CTAAATTGGAGGAGGGAATAAAATGGACTTACCGTTATCAAAACGTGTCAAAGGAGTGGCCCCGTCGCCAACACTTGCGA
TTACGGCTAAAGCAAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQV
DLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKE
TPIWEVAYLDKNDKLNYFDINFETGEWYREIENL

Sequences:

>Translated_194_residues
MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQV
DLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKE
TPIWEVAYLDKNDKLNYFDINFETGEWYREIENL
>Mature_194_residues
MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQV
DLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKE
TPIWEVAYLDKNDKLNYFDINFETGEWYREIENL

Specific function: Unknown

COG id: COG5353

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 22822; Mature: 22822

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRY
CEEECCCCHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKS
HCCCCCCCHHHHHHHHCCEEEEEECCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCC
DKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDI
CEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEE
NFETGEWYREIENL
EECCHHHHHHHHCC
>Mature Secondary Structure
MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRY
CEEECCCCHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKS
HCCCCCCCHHHHHHHHCCEEEEEECCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCC
DKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDI
CEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEE
NFETGEWYREIENL
EECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]