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The map label for this gene is 226224460

Identifier: 226224460

GI number: 226224460

Start: 1919294

End: 1919527

Strand: Reverse

Name: 226224460

Synonym: Lm4b_01873

Alternate gene names: NA

Gene position: 1919527-1919294 (Counterclockwise)

Preceding gene: 226224461

Following gene: 226224459

Centisome position: 65.9

GC content: 35.9

Gene sequence:

>234_bases
TTGGGAAGATCATTTTATCATTTTTTAATGACATATCGGGACCCGAAGCTAACAGATCAGAAAACGGAATTTGCCAACAA
TGCATACCGAGATCATAGTTTTCCAAAGCAAACAAGAAACTACCATATTCTTTGTGATTATCTGGAGTTTAATGCGCCGT
ATTTACCGGGAATGTCTATTTTTGATGAACTTTGGGATGCTTATTTGCTAGATGAAGAGAAAAACAAACACTAG

Upstream 100 bases:

>100_bases
GACTTGCAGAAGAAATTCTACGTAAAATCGAAAATTAACTTTATTTTTTTCAGGAAATCAACTATAGTTAAAGCATAAAA
AGAGCGGAGTGTGTTGTACG

Downstream 100 bases:

>100_bases
GAGGAAAAAAGATGAGCGTACATATCGAAGCAAAACAAGGGGAAATTGCAGAAACTATTTTATTACCAGGAGATCCATTG
AGAGCAAAATATATTGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MGRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHILCDYLEFNAPYLPGMSIFDELWDAYLLDEEKNKH

Sequences:

>Translated_77_residues
MGRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHILCDYLEFNAPYLPGMSIFDELWDAYLLDEEKNKH
>Mature_76_residues
GRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHILCDYLEFNAPYLPGMSIFDELWDAYLLDEEKNKH

Specific function: Unknown

COG id: COG4479

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0346 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1857_LISMO (Q8Y643)

Other databases:

- EMBL:   AL591981
- PIR:   AI1306
- RefSeq:   NP_465382.1
- ProteinModelPortal:   Q8Y643
- SMR:   Q8Y643
- GeneID:   985942
- GenomeReviews:   AL591824_GR
- KEGG:   lmo:lmo1857
- GenoList:   LMO1857
- HOGENOM:   HBG337371
- OMA:   ELNAGYL
- ProtClustDB:   PRK13672
- BioCyc:   LMON169963:LMO1857-MONOMER
- HAMAP:   MF_01538
- InterPro:   IPR010673
- InterPro:   IPR023089
- PIRSF:   PIRSF037262

Pfam domain/function: PF06855 DUF1250

EC number: NA

Molecular weight: Translated: 9403; Mature: 9271

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHILCDYLEFNAPYLPGMSI
CCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHH
FDELWDAYLLDEEKNKH
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHILCDYLEFNAPYLPGMSI
CCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHH
FDELWDAYLLDEEKNKH
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669