| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is dbpA [H]
Identifier: 226223849
GI number: 226223849
Start: 1257157
End: 1258569
Strand: Direct
Name: dbpA [H]
Synonym: Lm4b_01254
Alternate gene names: 226223849
Gene position: 1257157-1258569 (Clockwise)
Preceding gene: 226223847
Following gene: 226223850
Centisome position: 43.16
GC content: 36.8
Gene sequence:
>1413_bases ATGAATAATTTAAAATTAAGTGAAGAAATTAAAAGAGCGATTAATGAACTAGGATATACAGAAGCAACACCCGTTCAAAA AGCGGTAATTCCAGTTGCCTTAACAGGAGAAGATATTGTTGCTAAATCACAAACTGGTAGTGGGAAAACAGCAGCATTCG CTATTCCCATTGCAGAACAGATTGAATGGGAAGAAAATAAGCCACAAGCACTAATCATCGTTCCAACACGAGAACTTGCA ATGCAAGTCAAGACAGAATGTACGAATATTGGACGATTTAAACGTGTCAAAGCTGCAGCAATATACGGACAATCACCATT TGCGAAACAAAAATTAGAACTAAGCCAAAAAAATCATATCGTCGTTGGGACGCCTGGTCGCCTGCTGGATCATATTGAAA AAGGATCACTGAATGTCGACAAGGTTGCCCATTTAGTTTTAGATGAAGTAGATGAAATGTTAAGCATGGGATTTATTGAT CAAGTCGAAGATATTCTTAGCCGTTTACCAAAACAGCGCCAAAATCTATTTTTCTCAGCAACTATGCCAGAAGAAATGCA AGATTTGATTAAACGCTACCAAGATGATCCAATGGTAATCGAAATGGCATCGGAAAAAACAAACCCTATCTTCCACGTGG AGATGCAAACAGATAATAAAGAAAAAACGCTAAAAGATGTTTTGATTACAGAAAATCCGGATAGCGCAATAATATTTTGC AATACGAAAAATCAAGTCGATGAACTCACCGATTTACTTGATGTAAAAGTTAGTAAAATTCATGGGGGTTTAAGACAAGA AGACCGTTTCCGAGCAATGGATGATTTTAAAAGTGGCAAATCCCGTTTCTTAATTGCGACAGATGTGGCAGGGCGCGGAA TAGATGTGGATAATGTATCGTTAGTCATTAACTACGATTTACCAATTGAAAAAGAAAATTATGTACATCGTATCGGTCGT ACTGGTCGCGCTGGCAAAAGTGGTAAAGCTATTAGTTTCGTGAAAACAAATGAAAATCCACTTTTGCGTGACATAGAAGA AATGCTCGATGTTACAATCGAAAAAAAACGTAAACCGACAGTGATAGAAGTGAAAGCTAACGAAGAAGCTTTCCGCAAAA AACAACAAAAGCGCCCAACAATCAAAAAAGCTCGTGGGGAAAAATTAAATAAAAACATTATGAAACTGTATTTTAATGGT GGAAAAAAGAAAAAAATTCGTGCAGTAGATTTTGTTGGAACTATTTCTAAATTAGAAGGAATTACGGCCGAAGATATCGG AATTATTACGATTGAAGACCATGTTTCTTTTGTTGAAATTTTAAATGGAAAAGGTCCGGCAGTACTGGAAATGATGCGCT CTCGTAAAGTAAAAGGTAGACGCCTGAAAGTAAACGAGGCCAGAAAACGATAA
Upstream 100 bases:
>100_bases TTAGAGTTCATTCTAAAGGAAGGAGGGATAAAGTACAAACAATTCGTTCCATCATTTGTGAAAAAATATGGTATGATGAT ATGAGGAAATGAGGACTGAC
Downstream 100 bases:
>100_bases ATTAAAGAAAAGAAGGTCCAAACAATGGAAAGGCCAGATAATCAACTTATTTTAATGGTGTTAGAAGTTGTTAAAAATCC ACTTTACAATATAAAATCAC
Product: ATP-dependent RNA helicase (DEAD motif)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQIEWEENKPQALIIVPTRELA MQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFID QVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC NTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGR TGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPTVIEVKANEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNG GKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR
Sequences:
>Translated_470_residues MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQIEWEENKPQALIIVPTRELA MQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFID QVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC NTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGR TGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPTVIEVKANEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNG GKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR >Mature_470_residues MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQIEWEENKPQALIIVPTRELA MQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFID QVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC NTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGR TGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPTVIEVKANEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNG GKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=363, Percent_Identity=38.8429752066116, Blast_Score=268, Evalue=8e-72, Organism=Homo sapiens, GI164664518, Length=356, Percent_Identity=37.0786516853933, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=40, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=40.4371584699454, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI169881239, Length=417, Percent_Identity=36.6906474820144, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI13514809, Length=417, Percent_Identity=36.6906474820144, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI301171467, Length=419, Percent_Identity=36.7541766109785, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=36.2116991643454, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI87196351, Length=404, Percent_Identity=37.6237623762376, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI301171475, Length=404, Percent_Identity=37.6237623762376, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI148613856, Length=331, Percent_Identity=39.2749244712991, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI38201710, Length=331, Percent_Identity=39.2749244712991, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI222352149, Length=392, Percent_Identity=34.4387755102041, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI41327771, Length=387, Percent_Identity=35.9173126614987, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=36.3636363636364, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=34.5403899721448, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI50659095, Length=386, Percent_Identity=34.4559585492228, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI262118318, Length=350, Percent_Identity=37.7142857142857, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=34.1968911917098, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI216548263, Length=351, Percent_Identity=37.6068376068376, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI262231852, Length=351, Percent_Identity=37.6068376068376, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI13518015, Length=351, Percent_Identity=37.6068376068376, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI45446747, Length=402, Percent_Identity=34.0796019900498, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI45446743, Length=402, Percent_Identity=34.0796019900498, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=36.0215053763441, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=35.4395604395604, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI164419743, Length=365, Percent_Identity=33.972602739726, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI51094101, Length=365, Percent_Identity=33.972602739726, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI21071032, Length=383, Percent_Identity=34.7258485639687, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI188035877, Length=389, Percent_Identity=33.9331619537275, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI41327776, Length=351, Percent_Identity=34.1880341880342, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI4758112, Length=364, Percent_Identity=32.6923076923077, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI18375623, Length=364, Percent_Identity=32.6923076923077, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI55749865, Length=405, Percent_Identity=32.0987654320988, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=32.1428571428571, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=31.830985915493, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI6005743, Length=375, Percent_Identity=33.8666666666667, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI8922886, Length=375, Percent_Identity=33.6, Blast_Score=182, Evalue=9e-46, Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=34.5303867403315, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=32.8729281767956, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI41327779, Length=360, Percent_Identity=32.7777777777778, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI13514831, Length=397, Percent_Identity=30.7304785894207, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=35.5882352941176, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI38569503, Length=362, Percent_Identity=32.8729281767956, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI38569505, Length=362, Percent_Identity=32.8729281767956, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI9506931, Length=459, Percent_Identity=28.1045751633987, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI38327634, Length=358, Percent_Identity=31.2849162011173, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI256773275, Length=375, Percent_Identity=28.5333333333333, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI4826686, Length=397, Percent_Identity=30.7304785894207, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=31.5789473684211, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI154759257, Length=417, Percent_Identity=28.537170263789, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI17505907, Length=224, Percent_Identity=33.9285714285714, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=33.9285714285714, Blast_Score=109, Evalue=6e-24, Organism=Escherichia coli, GI1787605, Length=458, Percent_Identity=36.8995633187773, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI87082221, Length=365, Percent_Identity=42.7397260273973, Blast_Score=296, Evalue=3e-81, Organism=Escherichia coli, GI1787016, Length=362, Percent_Identity=39.5027624309392, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1790214, Length=350, Percent_Identity=35.1428571428571, Blast_Score=215, Evalue=5e-57, Organism=Escherichia coli, GI1788930, Length=383, Percent_Identity=33.1592689295039, Blast_Score=193, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=39.8351648351648, Blast_Score=272, Evalue=2e-73, Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=38.5674931129477, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=38.2920110192837, Blast_Score=268, Evalue=7e-72, Organism=Caenorhabditis elegans, GI32565321, Length=386, Percent_Identity=36.0103626943005, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17552114, Length=358, Percent_Identity=34.6368715083799, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=36.5650969529086, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17510307, Length=380, Percent_Identity=36.0526315789474, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115533224, Length=356, Percent_Identity=36.2359550561798, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17510309, Length=380, Percent_Identity=36.0526315789474, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=36.0526315789474, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=37.037037037037, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI71995718, Length=394, Percent_Identity=35.2791878172589, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=33.7078651685393, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=37.0056497175141, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=34.1880341880342, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71982858, Length=383, Percent_Identity=33.420365535248, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=33.5958005249344, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI115532546, Length=390, Percent_Identity=32.8205128205128, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115532548, Length=366, Percent_Identity=33.6065573770492, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17507881, Length=363, Percent_Identity=35.5371900826446, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17553716, Length=361, Percent_Identity=33.7950138504155, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17537549, Length=411, Percent_Identity=32.1167883211679, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17507877, Length=363, Percent_Identity=33.8842975206612, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=33.6842105263158, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=33.2386363636364, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17552642, Length=375, Percent_Identity=32, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=32.3943661971831, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI193206561, Length=325, Percent_Identity=29.2307692307692, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17536099, Length=402, Percent_Identity=29.8507462686567, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17536101, Length=402, Percent_Identity=29.8507462686567, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17508543, Length=355, Percent_Identity=30.1408450704225, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI25148203, Length=459, Percent_Identity=27.2331154684096, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17536103, Length=402, Percent_Identity=30.0995024875622, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=29.5039164490862, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71990816, Length=352, Percent_Identity=32.6704545454545, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17556951, Length=466, Percent_Identity=26.3948497854077, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=29.1891891891892, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=30.7086614173228, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71982862, Length=214, Percent_Identity=35.981308411215, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI25148291, Length=367, Percent_Identity=28.8828337874659, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=26.2734584450402, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=53.5353535353535, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148205, Length=388, Percent_Identity=25.5154639175258, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17566630, Length=339, Percent_Identity=26.2536873156342, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71987993, Length=341, Percent_Identity=25.5131964809384, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71987997, Length=341, Percent_Identity=25.5131964809384, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=39.9449035812672, Blast_Score=253, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6324217, Length=332, Percent_Identity=39.7590361445783, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6321856, Length=357, Percent_Identity=38.375350140056, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=359, Percent_Identity=38.9972144846797, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6325138, Length=373, Percent_Identity=38.0697050938338, Blast_Score=239, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=36.0335195530726, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=37.3219373219373, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6322912, Length=364, Percent_Identity=37.6373626373626, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6322323, Length=364, Percent_Identity=37.6373626373626, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=35.933147632312, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=34.5744680851064, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=362, Percent_Identity=32.5966850828729, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=366, Percent_Identity=34.9726775956284, Blast_Score=196, Evalue=9e-51, Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=34.1269841269841, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=33.0532212885154, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=32.409972299169, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=456, Percent_Identity=29.3859649122807, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=398, Percent_Identity=31.6582914572864, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=413, Percent_Identity=35.8353510895884, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=29.4429708222812, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=31.2039312039312, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=406, Percent_Identity=28.8177339901478, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6320173, Length=202, Percent_Identity=33.1683168316832, Blast_Score=130, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=404, Percent_Identity=25.2475247524752, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=381, Percent_Identity=25.1968503937008, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324366, Length=162, Percent_Identity=30.2469135802469, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=38.8429752066116, Blast_Score=261, Evalue=5e-70, Organism=Drosophila melanogaster, GI24582080, Length=364, Percent_Identity=40.6593406593407, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI24582078, Length=364, Percent_Identity=40.6593406593407, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI17136248, Length=364, Percent_Identity=40.6593406593407, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI24582075, Length=364, Percent_Identity=40.6593406593407, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI24584994, Length=394, Percent_Identity=36.5482233502538, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24585582, Length=357, Percent_Identity=35.8543417366947, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=35.7746478873239, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584399, Length=336, Percent_Identity=38.6904761904762, Blast_Score=231, Evalue=7e-61, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=36.4672364672365, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=35.8090185676393, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI17985987, Length=399, Percent_Identity=36.8421052631579, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=34.6153846153846, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=34.6153846153846, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24642151, Length=376, Percent_Identity=35.9042553191489, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=35.2272727272727, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=34.5744680851064, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI17977678, Length=368, Percent_Identity=36.6847826086957, Blast_Score=212, Evalue=6e-55, Organism=Drosophila melanogaster, GI17136814, Length=368, Percent_Identity=36.1413043478261, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI28575014, Length=415, Percent_Identity=30.3614457831325, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24662330, Length=348, Percent_Identity=33.0459770114943, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=33.5164835164835, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=33.5164835164835, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=33.5164835164835, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI281365720, Length=297, Percent_Identity=34.3434343434343, Blast_Score=178, Evalue=7e-45, Organism=Drosophila melanogaster, GI20130173, Length=438, Percent_Identity=29.6803652968037, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI28571808, Length=354, Percent_Identity=32.2033898305085, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI28571809, Length=354, Percent_Identity=32.2033898305085, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI17647335, Length=350, Percent_Identity=29.7142857142857, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI21355559, Length=402, Percent_Identity=30.3482587064677, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24642822, Length=381, Percent_Identity=29.6587926509186, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=31.3888888888889, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=31.8318318318318, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24643725, Length=427, Percent_Identity=26.463700234192, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI17136666, Length=417, Percent_Identity=29.2565947242206, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI19920478, Length=346, Percent_Identity=28.6127167630058, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI28571338, Length=208, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI18859659, Length=208, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24640164, Length=390, Percent_Identity=24.6153846153846, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24646066, Length=119, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 53016; Mature: 53016
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQ CCCCCHHHHHHHHHHHCCCCCCCCCHHEEEEEEECCCHHEEECCCCCCCEEEEEECHHHH IEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHI CCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCHHHHHHHCCCCEE VVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSA EEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCEEEEE TMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC CCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHEEEECCCCCEEEEE NTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVS CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEE LVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPT EEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC VIEVKANEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEG EEEEECCHHHHHHHHHCCCCHHHHCCCHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHCC ITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR CCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCHHHCC >Mature Secondary Structure MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQ CCCCCHHHHHHHHHHHCCCCCCCCCHHEEEEEEECCCHHEEECCCCCCCEEEEEECHHHH IEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHI CCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCHHHHHHHCCCCEE VVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSA EEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCEEEEE TMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC CCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHEEEECCCCCEEEEE NTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVS CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEE LVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPT EEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC VIEVKANEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEG EEEEECCHHHHHHHHHCCCCHHHHCCCHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHCC ITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR CCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]