| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223786
Identifier: 226223786
GI number: 226223786
Start: 1193649
End: 1194194
Strand: Direct
Name: 226223786
Synonym: Lm4b_01190
Alternate gene names: NA
Gene position: 1193649-1194194 (Clockwise)
Preceding gene: 226223785
Following gene: 226223787
Centisome position: 40.98
GC content: 40.11
Gene sequence:
>546_bases ATGGCTGAACAGTCCTTAGGTATTCTTGAACTCAGGAGTATAAGTAAAGGGTACGAAATGGCCGATGTTTTCTTGAAAGC AGGCAATGTAACTTTATTTACTTTTCGTCCGACATGTCCTGGTAAATTTTTGATTATTTTGCAAGGTGCTTCCGGTGAAC TTACTAGTGCGATGCAAGATGCAAAAGAAGAAGCTGGCAAATTTCATGTTTCTTCTTATATTTTGCATATGGCGCACGAA GAATTACTTGCTTTTCTAAACAATAAACACCCTAAAGTGGAAGTTGACGCAGTAGGAATTATCGAAATCAGTCAGTTGGG CGCTGGACTAAATGCAGTAAATGAAGCGCTGAAAAAATCGGCTATTCATTTGAAACGCATGACGCTCGGTGCTTCGATTG GTGGGAAATTTGTGGCTGTTTTTACAGGGGAAGTTAGTGCTATTCAAGAAGGGATGCGGATTCTAATCGAAACCGCCGAA CCAAAAAAGGTGATACATCATACGGTCATTCCTTCTCCTGATGAACTTTTAAAACGCTATCTATAG
Upstream 100 bases:
>100_bases GTGCTCGTTACAACTGGTAGCGCAGCACGAGCATCCACTGGGGACAACACGATCCCAGTGGACGCATGTATCGTCGGCAT TATCGACTCGGTAGAACGTT
Downstream 100 bases:
>100_bases AATGGAGGAACACTTTTGAGCATTAATGAAATTATTATTTATTTAATGGTAATCTTTATGATTCTAGGAGCTATTGACAA AATTATCGGCAACAAATTTG
Product: PduT protein
Products: NA
Alternate protein names: BMC Domain Protein; Propanediol Utilization Protein PduT; Propanediol Utilization Protein Polyhedral Bodies; PduT Protein; Propanediol Utilization Protein; Ethanolamine Utilization Protein EutM; Propanediol Utilization Polyhedral Bodies PduT; Propanediol Utilization Polyhedral Body Protein PduT; Ethanolamine/Propanediol Utilization Protein; Ethanolamine Utilization Protein; Microcompartment Shellprotein; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFLIILQGASGELTSAMQDAKEEAGKFHVSSYILHMAHE ELLAFLNNKHPKVEVDAVGIIEISQLGAGLNAVNEALKKSAIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAE PKKVIHHTVIPSPDELLKRYL
Sequences:
>Translated_181_residues MAEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFLIILQGASGELTSAMQDAKEEAGKFHVSSYILHMAHE ELLAFLNNKHPKVEVDAVGIIEISQLGAGLNAVNEALKKSAIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAE PKKVIHHTVIPSPDELLKRYL >Mature_180_residues AEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFLIILQGASGELTSAMQDAKEEAGKFHVSSYILHMAHEE LLAFLNNKHPKVEVDAVGIIEISQLGAGLNAVNEALKKSAIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAEP KKVIHHTVIPSPDELLKRYL
Specific function: Unknown
COG id: COG4577
COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19683; Mature: 19552
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFLIILQGASGELTSAMQD CCCCCCCHHHHHHHHCCHHHHHHHEECCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHH AKEEAGKFHVSSYILHMAHEELLAFLNNKHPKVEVDAVGIIEISQLGAGLNAVNEALKKS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHH AIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAEPKKVIHHTVIPSPDELLKRY HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHC L C >Mature Secondary Structure AEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFLIILQGASGELTSAMQD CCCCCCHHHHHHHHCCHHHHHHHEECCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHH AKEEAGKFHVSSYILHMAHEELLAFLNNKHPKVEVDAVGIIEISQLGAGLNAVNEALKKS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHH AIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAEPKKVIHHTVIPSPDELLKRY HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA