| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223771
Identifier: 226223771
GI number: 226223771
Start: 1179512
End: 1180387
Strand: Direct
Name: 226223771
Synonym: Lm4b_01175
Alternate gene names: NA
Gene position: 1179512-1180387 (Clockwise)
Preceding gene: 226223770
Following gene: 226223772
Centisome position: 40.5
GC content: 42.24
Gene sequence:
>876_bases GTGGTAATTAAAGCGAGGTGTCCGGCATCTTGTGGCGAACTTTTGCAAGGCTGGATTTTAGGCGGAGAGAAGCTAATTTC ATACCCAATCAACTGGTATTCCGAAGTCACTTTATCTGATAAAGTAGGACTAAATAACTCCGGGCATACAAAAGCATGGC TCGCATTCCAAACCACTTGCGAGTATTTTGGTGTGGCTAAAAGAGACCTCCCGCAAGTATCTTTACAAGTGAAGTCAACT ATTCCGGTCGCGAAAGGCATGGCAAGTTCCACCGCTGATATTGCCGCAACAATTGGCGCTACAGCAAAATGGCTGAATAA ATCTATCTCAGAAGCTGAAATTGCCAAGCTATGTTTACAACTAGAACCAACGGATAGCACTATTTTTGAATCACTAACTT TGTTCGATCACTTAAGAGGGGACATCATTCAAAGCTCCAATTGGATGCCAAAGCTAGGCGTCGTTGTGTTAGAACCGCTT ACCATTTTAGAAACAGCTACTTATCGGCAAGAAAATCACCAAGCGCAATTACTCAAAAACGAAGGACATCTAGCAAAAGG AATGGACTATTTTCAACAAGCCGTCACGCAAAAATCCATTCACTTACTTGGTAAAGCCGCATCAGTTAGTGCAGCCTGCA ACCAAACTATTTTGCCAAAACCATTTTGGCGAGAGATTGTGGAAGTGACGGAAAACTTGGATTTAGTGGGGTTAAATGTT TCGCATAGTGGTACCGTTGTCGGTATACTTTATGAACTCGAAAAAACGGATCCACTCGAAATTTTATTTGAGCTAGAACG GCGCTATGTCACGACTTTTTACAGTCGATATTATTTCCGTGAGTTTGTCAGTGGTGGGGTTCAAATTATCTCGTAA
Upstream 100 bases:
>100_bases TGCGCTAATTACCGAGGTCTCACGGAGAATTATTACCGAGTGGCAGTGAAAAGTAGAGAAGATAATCGCCAACTCTTAAC CGCACTTGAGGTGATTTTTA
Downstream 100 bases:
>100_bases AGCAAATTCTTCTTGCAAGCGGTCTATTTTATGCTATAATAACTTTGATAAACGAATTCGTTCATACAAACAGTTAGATA CTGGAAGTCTGGTGAAAGTC
Product: PduX protein
Products: NA
Alternate protein names: Kinase; Propanediol Utilization Protein PduX; Ghmp Kinase; PduX-Like Protein; Protein Involved In Propanediol Utilization; Propanediol Utilization Kinase PduX; L-Threonine Kinase; PduX Protein; Cobalamin Biosynthesis Kinase; Propanediol Utilization Kinase; GHMP Kinase Domain Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGLNNSGHTKAWLAFQTTCEYFGVAKRDLPQVSLQVKST IPVAKGMASSTADIAATIGATAKWLNKSISEAEIAKLCLQLEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPL TILETATYRQENHQAQLLKNEGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTILPKPFWREIVEVTENLDLVGLNV SHSGTVVGILYELEKTDPLEILFELERRYVTTFYSRYYFREFVSGGVQIIS
Sequences:
>Translated_291_residues MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGLNNSGHTKAWLAFQTTCEYFGVAKRDLPQVSLQVKST IPVAKGMASSTADIAATIGATAKWLNKSISEAEIAKLCLQLEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPL TILETATYRQENHQAQLLKNEGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTILPKPFWREIVEVTENLDLVGLNV SHSGTVVGILYELEKTDPLEILFELERRYVTTFYSRYYFREFVSGGVQIIS >Mature_291_residues MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGLNNSGHTKAWLAFQTTCEYFGVAKRDLPQVSLQVKST IPVAKGMASSTADIAATIGATAKWLNKSISEAEIAKLCLQLEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPL TILETATYRQENHQAQLLKNEGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTILPKPFWREIVEVTENLDLVGLNV SHSGTVVGILYELEKTDPLEILFELERRYVTTFYSRYYFREFVSGGVQIIS
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32306; Mature: 32306
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGLNNSGHTKAWLAFQTTC CEEECCCCHHHHHHHHHHHCCCHHEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHH EYFGVAKRDLPQVSLQVKSTIPVAKGMASSTADIAATIGATAKWLNKSISEAEIAKLCLQ HHHCCHHCCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHC LEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPLTILETATYRQENHQAQLLKN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCHHHHHHHHHHHCCCHHHHHHC EGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTILPKPFWREIVEVTENLDLVGLNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEE SHSGTVVGILYELEKTDPLEILFELERRYVTTFYSRYYFREFVSGGVQIIS CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGLNNSGHTKAWLAFQTTC CEEECCCCHHHHHHHHHHHCCCHHEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHH EYFGVAKRDLPQVSLQVKSTIPVAKGMASSTADIAATIGATAKWLNKSISEAEIAKLCLQ HHHCCHHCCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHC LEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPLTILETATYRQENHQAQLLKN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCHHHHHHHHHHHCCCHHHHHHC EGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTILPKPFWREIVEVTENLDLVGLNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEE SHSGTVVGILYELEKTDPLEILFELERRYVTTFYSRYYFREFVSGGVQIIS CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA