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The map label for this gene is ccmL [H]

Identifier: 226223764

GI number: 226223764

Start: 1172609

End: 1172872

Strand: Direct

Name: ccmL [H]

Synonym: Lm4b_01168

Alternate gene names: 226223764

Gene position: 1172609-1172872 (Clockwise)

Preceding gene: 226223763

Following gene: 226223765

Centisome position: 40.26

GC content: 40.53

Gene sequence:

>264_bases
ATGTTTATGGCAAAAATAACAGGAAGTGTAGTTTCCACAAAAAAAGAAGACTCACTTACTGGTAAAAAATTGATGATTGT
ACAACCGGTTGATGCAAATGGAGAGCATGTGCGCTCAGAAGAAGTAGCGTGTGACTCTGTTGGGGCAGGAATTGGGGAGT
ATGTGCTTGTTGCTCGTGGCAATGCAGCTAGAAGTGTTTTTGCGGAACCAAATAGTGCGATTGATTCGGCAATTATTGCA
ATTGTCGATAGTTTTGATAAGTAA

Upstream 100 bases:

>100_bases
GGAAGTACACTTTGCAAATATAAAAAGCAGCTTATTACACCGCTTGCAAATGAATATTTAACGAAAAATAATATTGCAGT
GCGGGAAAGGCAGTGACGTT

Downstream 100 bases:

>100_bases
GGAGTGAATAACTCGTGAGTATTTATACCAAAACCGGCGATAAGGGAACGACTGCATTATTTGATGGGAATCGTGTGAAA
AAATATGATGACCGTGTCGA

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVACDSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIA
IVDSFDK

Sequences:

>Translated_87_residues
MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVACDSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIA
IVDSFDK
>Mature_87_residues
MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVACDSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIA
IVDSFDK

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=83, Percent_Identity=37.3493975903614, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 9114; Mature: 9114

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVACDSVGAGIGEYVLVARG
CEEECCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
NAARSVFAEPNSAIDSAIIAIVDSFDK
CCCCEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVACDSVGAGIGEYVLVARG
CEEECCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
NAARSVFAEPNSAIDSAIIAIVDSFDK
CCCCEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]