Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226223758

Identifier: 226223758

GI number: 226223758

Start: 1169532

End: 1169879

Strand: Direct

Name: 226223758

Synonym: Lm4b_01162

Alternate gene names: NA

Gene position: 1169532-1169879 (Clockwise)

Preceding gene: 226223757

Following gene: 226223759

Centisome position: 40.15

GC content: 38.79

Gene sequence:

>348_bases
ATGATTCCAGTTGTTAGTAAGCCAGCAATTTATTTTCATGCAGATGTAGACGCGAATCCAGACAGTATTAAACAAGTTTT
ATTTGGAATAGAAGAAGAAGGCATTCCATGTGAATTAGAAATTATGTCTTTGAAAGACGAAGTGCAAGCAGCATTTCGAG
CATCTGCGAGTTCTCCGCTTCTAGTAGGGGTTACGCTGAAAAATGATCATTTAGTGATTCATTATCGTAATTTACCCCCA
GATAAACCACTATTTTCAGCGTATCGTTTTTGCGCAACCACACTAGAAAACCAGCGAAATATGGGAATGAATGCGGCGCG
ACTTGTCAAGGGTGTACCTTTTAAATAA

Upstream 100 bases:

>100_bases
CTCATTATTCACTCGTTGCTGGCCGTGGGAATATTCGTGGTAAAGAAGGCCCTAGAAATGCAGTTGCAACAGGCTTAATT
CTAGCTGGAGGTGCTAAGGC

Downstream 100 bases:

>100_bases
GGAGGTGAAGGAATGCATCAAGCAATTGGAATGATTGAAATTAAAGGACTTGCTTCAGCGATAACCGTAGCAGATACAAT
GGCAAAAGTAGCTAATATCC

Product: diol dehydratase-reactivating factor small chain

Products: NA

Alternate protein names: PduH Protein; Propanediol Utilization Protein PduH; Propanediol Utilization Diol Dehydratase Reactivation; Propanediol Dehydratase Reactivation Protein; Propanediol Dehydratase Reactivation Factor Small Subunit; Diol Dehydratase-Reactivating Factor Small Chain; Propanediol Dehydratase Reactivation Protein PduH; Propanediol Utilization Diol Dehydratase Reactivation PduH

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPP
DKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK

Sequences:

>Translated_115_residues
MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPP
DKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK
>Mature_115_residues
MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPP
DKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12757; Mature: 12757

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPL
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCE
LVGVTLKNDHLVIHYRNLPPDKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK
EEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPL
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCE
LVGVTLKNDHLVIHYRNLPPDKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK
EEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA