Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223758
Identifier: 226223758
GI number: 226223758
Start: 1169532
End: 1169879
Strand: Direct
Name: 226223758
Synonym: Lm4b_01162
Alternate gene names: NA
Gene position: 1169532-1169879 (Clockwise)
Preceding gene: 226223757
Following gene: 226223759
Centisome position: 40.15
GC content: 38.79
Gene sequence:
>348_bases ATGATTCCAGTTGTTAGTAAGCCAGCAATTTATTTTCATGCAGATGTAGACGCGAATCCAGACAGTATTAAACAAGTTTT ATTTGGAATAGAAGAAGAAGGCATTCCATGTGAATTAGAAATTATGTCTTTGAAAGACGAAGTGCAAGCAGCATTTCGAG CATCTGCGAGTTCTCCGCTTCTAGTAGGGGTTACGCTGAAAAATGATCATTTAGTGATTCATTATCGTAATTTACCCCCA GATAAACCACTATTTTCAGCGTATCGTTTTTGCGCAACCACACTAGAAAACCAGCGAAATATGGGAATGAATGCGGCGCG ACTTGTCAAGGGTGTACCTTTTAAATAA
Upstream 100 bases:
>100_bases CTCATTATTCACTCGTTGCTGGCCGTGGGAATATTCGTGGTAAAGAAGGCCCTAGAAATGCAGTTGCAACAGGCTTAATT CTAGCTGGAGGTGCTAAGGC
Downstream 100 bases:
>100_bases GGAGGTGAAGGAATGCATCAAGCAATTGGAATGATTGAAATTAAAGGACTTGCTTCAGCGATAACCGTAGCAGATACAAT GGCAAAAGTAGCTAATATCC
Product: diol dehydratase-reactivating factor small chain
Products: NA
Alternate protein names: PduH Protein; Propanediol Utilization Protein PduH; Propanediol Utilization Diol Dehydratase Reactivation; Propanediol Dehydratase Reactivation Protein; Propanediol Dehydratase Reactivation Factor Small Subunit; Diol Dehydratase-Reactivating Factor Small Chain; Propanediol Dehydratase Reactivation Protein PduH; Propanediol Utilization Diol Dehydratase Reactivation PduH
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPP DKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK
Sequences:
>Translated_115_residues MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPP DKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK >Mature_115_residues MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPP DKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12757; Mature: 12757
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPL CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCE LVGVTLKNDHLVIHYRNLPPDKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK EEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC >Mature Secondary Structure MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSLKDEVQAAFRASASSPL CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCE LVGVTLKNDHLVIHYRNLPPDKPLFSAYRFCATTLENQRNMGMNAARLVKGVPFK EEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA