Definition | Listeria monocytogenes Clip81459, complete genome. |
---|---|
Accession | NC_012488 |
Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223757
Identifier: 226223757
GI number: 226223757
Start: 1167715
End: 1169535
Strand: Direct
Name: 226223757
Synonym: Lm4b_01161
Alternate gene names: NA
Gene position: 1167715-1169535 (Clockwise)
Preceding gene: 226223756
Following gene: 226223758
Centisome position: 40.09
GC content: 42.67
Gene sequence:
>1821_bases ATGAAGTATATTGCAGGGATTGATATCGGGAATTCTACAACGGAAGTGGCACTTGCGATGGCAAACTATTCGAAGGAAGT AGCGTTTGTTGCTAGTGCTATTACGGACACAACCGGTATCAAAGGAACAAAACAAAATCTTCACGGGATTTTTAAAGCGT TGCGACTTGCTTTAGAGAAAGTAAATGCGACAACCGAGAACTTAGCCGAAATCCGTATCAATGAAGCGACACCAGTGATT GGCGATGTGGCAATGGAAACTATTACAGAAACAATCATTACTGAGTCTACAATGATTGGTCACAATCCTAAAACACCAGG GGGACTTGGTATGGGTTCAGGTGTGACGGTGCTGTTGGATGACGTTACATCTAAATCAAAAGATGAGGACTACATTGTGA TTATCCCGAAAACAGTCGATTTTGAAGATGCAGCAAAGCAAATTAATACTTACGTCGAAAATGGCTATCAAATCACAGCT GCAATTCTTCAAGCAGATGATGGGGTTCTCGTGCATAACCGACTAAACCATAAGATTCCGATTGTCGATGAAGTTGGTTT TATTGATAAAGTGCCGGTCGATATGTTAGCAGCTGTCGAAGTTGCAGCTCCCGGAAAAGTCATTGAAACCATTTCTAACC CATATGGTATTGCGACAGTATTTCATTTGAATTCAGATGAAACGAAAAATATCATTCCTGTGGCACGAGCTTTAATTGGC AATCGTTCGGCGGTGGTGATTAAAACGCCAGAAGGTGATGTCAAAGCTCGAACAATACCAGCGGGGCATATCGAACTTCA ATCAGGATCCAGAACGCAGCGTGTCAATGTCGCAGAAGGTTCTGAGAAAATCATGCAAGCCATTATGTCACTTCCAAAAC TCGACAATGCTAGCGGAGAACCAGGAACAAATATCGGTGGCATGCTAGAAAAAGTGCGCCAAACGATGGCTGGGCTAACA GATAAATTACCAGCTGATATTTTTATTCAAGATTTGCTAGCTGTGGATACATTTGTTCCAGTAGACGTTCAAGGTGGGCT TGCAGGTGAGTTTTCCATGGAACAAGCGGTTGGTATTGCCTCCATGGTAAAAAGTGATCACTTACAAATGGCAGCCATCG CCTCAGAAATCGAACAAGAACTGCAAGTAAGCGTCAAAATTGGTGGTGCAGAAGCAGAGGCTGCCATTCTCGGAGCGCTT ACTACACCGGGAACTAATACTCCACTTGCCATTTTAGATTTAGGTGCTGGATCCACAGATGCCTCGATTATCAACGGAAA AGGAGAAATTATCGCAACTCATTTAGCTGGCGCTGGCGATATGGTAACGATGATTATCCAGTCAGAAATTGGCCTTGAAG ACCGTTATTTAGCCGAAGATATTAAAAAATATCCGCTTGCTAAAGTTGAAAGTATTTTCCACATTCGGCATGAAGATGGC ACAGTGCAATTTTTTGATACGCCGCTTTCTCCAACAGTTTTTGCCAAAGTGGTGATTGTAAAACCAGATGGCTTTGTGCC AATACCTGGGGATGTATCAATTGAAAAAATCAAGTTAATTCGCCGTTCAGCTAAGGAGCGTGTCTTTGTAACGAATACCA TCCGCGCTTTAAAATATGTCAGCCCAACTGGGAATATTCGAGATATTCCATTTGTCGTAATTGTTGGAGGATCAGCCCTT GATTTTGAGATTCCACAATTAATTACCGATGCACTTTCTCATTATTCACTCGTTGCTGGCCGTGGGAATATTCGTGGTAA AGAAGGCCCTAGAAATGCAGTTGCAACAGGCTTAATTCTAGCTGGAGGTGCTAAGGCATGA
Upstream 100 bases:
>100_bases TCGTGAAGCAGCACAGCTTTATCAAGAGCGTAAGAAATTAAAAGGCGATAATTAAAATTCTCCTTTTGCTCGCGATTATG TAGGAAATGCGGTGAAATGA
Downstream 100 bases:
>100_bases TTCCAGTTGTTAGTAAGCCAGCAATTTATTTTCATGCAGATGTAGACGCGAATCCAGACAGTATTAAACAAGTTTTATTT GGAATAGAAGAAGAAGGCAT
Product: diol dehydratase-reactivating factor large subunit
Products: NA
Alternate protein names: Diol/Glycerol Dehydratase Reactivating Factor Large Subunit; Glycerol Dehydratase Reactivation Factor; Propanediol Utilization Diol Dehydratase Reactivation PduG; Propanediol Dehydratase Reactivation Protein PduG; Propanediol Utilization ATPase; Diol Dehydratase Reactivation Protein; PduG Protein; Propanediol Dehydratase Reactivation Factor Large Subunit; Propanediol UtilizationDioldehydratase Reactivation
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MKYIAGIDIGNSTTEVALAMANYSKEVAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTENLAEIRINEATPVI GDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITA AILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIG NRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLT DKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGAL TTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDG TVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSAL DFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA
Sequences:
>Translated_606_residues MKYIAGIDIGNSTTEVALAMANYSKEVAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTENLAEIRINEATPVI GDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITA AILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIG NRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLT DKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGAL TTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDG TVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSAL DFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA >Mature_606_residues MKYIAGIDIGNSTTEVALAMANYSKEVAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTENLAEIRINEATPVI GDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITA AILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIG NRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLT DKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGAL TTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDG TVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSAL DFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64162; Mature: 64162
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIAGIDIGNSTTEVALAMANYSKEVAFVASAITDTTGIKGTKQNLHGIFKALRLALEK CCEEEEEECCCCHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VNATTENLAEIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLD HCCCHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEE DVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITAAILQADDGVLVHNRLNHKIP CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEECCCCCCCC IVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIG EEECCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHC NRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGE CCCEEEEECCCCCCEEEEECCCEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCC PGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIA CCCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHH SMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGALTTPGTNTPLAILDLGAGSTD HHHHHCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCCC ASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDG CEEECCCCCEEEEEECCCCCCEEEEEHHHCCCCHHHHHHHHHHCCHHHHHHHEEEEECCC TVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYV EEEEEECCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHCEEEEEEHHHHHEEE SPTGNIRDIPFVVIVGGSALDFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLIL CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHEEEE AGGAKA ECCCCC >Mature Secondary Structure MKYIAGIDIGNSTTEVALAMANYSKEVAFVASAITDTTGIKGTKQNLHGIFKALRLALEK CCEEEEEECCCCHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VNATTENLAEIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLD HCCCHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEE DVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITAAILQADDGVLVHNRLNHKIP CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEECCCCCCCC IVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIG EEECCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHC NRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGE CCCEEEEECCCCCCEEEEECCCEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCC PGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIA CCCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHH SMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGALTTPGTNTPLAILDLGAGSTD HHHHHCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCCC ASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDG CEEECCCCCEEEEEECCCCCCEEEEEHHHCCCCHHHHHHHHHHCCHHHHHHHEEEEECCC TVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYV EEEEEECCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHCEEEEEEHHHHHEEE SPTGNIRDIPFVVIVGGSALDFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLIL CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHEEEE AGGAKA ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA