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The map label for this gene is pduA [H]

Identifier: 226223752

GI number: 226223752

Start: 1163677

End: 1163964

Strand: Direct

Name: pduA [H]

Synonym: Lm4b_01156

Alternate gene names: 226223752

Gene position: 1163677-1163964 (Clockwise)

Preceding gene: 226223750

Following gene: 226223753

Centisome position: 39.95

GC content: 47.92

Gene sequence:

>288_bases
ATGCAAGAAGCACTAGGCTTAGTTGAAACTAAAGGGCTAGTCGGCGCCATTGAAGCCGCTGACGCCATGGTTAAATCAGC
TAATGTAACATTAACAGGGTACGAAAAAATCGGGTCTGGACTGGTTACTGTCATGGTTCGTGGCGATGTTGGTGCGGTGA
AAGCAGCGACAGAAGCAGGAGCGGCAGCAGCAAGAAATGTAGGTACCGTGATGAGTACACATGTTATTCCTCGTCCGCAT
ACTGATGTGGAAGAAATTTTACCAGTGAGGGTGAAGTCAGATGAGTGA

Upstream 100 bases:

>100_bases
TGGCGTCTTCTTTTTTTCTATTTGGAAGCGGCAACTATTTATATTCCGGATTGCCTATACTGAGAGAGTAAAATACTTAT
TTTGAGAAGGAGGTACACCC

Downstream 100 bases:

>100_bases
GCAAAATAAACTAATTGACGAAATTCTAAAACAGGTAATGGAAACGGTTAATGATGCCCCGGAAAAACTAGTAGAGGATG
GAGGATCACGTCAAATGAGT

Product: PduA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE

Sequences:

>Translated_95_residues
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE
>Mature_95_residues
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=92, Percent_Identity=63.0434782608696, Blast_Score=105, Evalue=8e-25,
Organism=Escherichia coli, GI87082105, Length=86, Percent_Identity=47.6744186046512, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9728; Mature: 9728

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHCCCEEEEEEECCCCCCHHHHHCC
AAAARNVGTVMSTHVIPRPHTDVEEILPVRVKSDE
HHHHHCCCHHHHHCCCCCCCCCHHHHCEEEEECCC
>Mature Secondary Structure
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHCCCEEEEEEECCCCCCHHHHHCC
AAAARNVGTVMSTHVIPRPHTDVEEILPVRVKSDE
HHHHHCCCHHHHHCCCCCCCCCHHHHCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]