Click here to switch to the map view.

The map label for this gene is 226223713

Identifier: 226223713

GI number: 226223713

Start: 1130214

End: 1131131

Strand: Direct

Name: 226223713

Synonym: Lm4b_01115

Alternate gene names: NA

Gene position: 1130214-1131131 (Clockwise)

Preceding gene: 226223712

Following gene: 226223714

Centisome position: 38.8

GC content: 29.19

Gene sequence:

>918_bases
ATGAAAAATTTTGATATTAGAATAGGAACGCAGACATTTGACAATGATACGGAAATCATTTTAAAAAGAGGGGTCATTCA
TAAGAACGAGCTCGTTATCAATAAAGAGGAAAGTTCAAAAGAATTTGTTTCAACTTTTAAAGAATTGATCAAGAAAAAAA
CTATCGCTATATCTTCAGAAGATGCAATCTACAATGATTTTGAAACACTTACAAAATTTGGTTTTTTGACAATTTCCAAA
AACCAAACACTAAAACCTCTTTTGGTAGTTGAAGATGCTTTATTTGATGACATGAAGAGCTATTTTCAGGAAGAAATTGA
GATTTTATCATCCTCTGAATTTCTTTTAAAAAAAGATATTCGGTTACTTACTGAGAACAAAGATATATTGCAACTTACCA
AACTAGTAGATGAAAAAAAAGAATTTTTGAAAAATTATAATTATATTTATTTAATCACAAACATTCCCAATATTTCCTTA
TTACGTGGATTTAACAAGTTAATGAAAGAGACTAACTGCATTAATACCATCGCATTTTTTGATAATGAAAATGTCTTTGT
TACTTGTATAGAACATGGCGAAACTGGGTGCTATGAGTGTTTAGAGCAGCAAATACTCTCTCATTTTGATGGTGTTGTTA
CGGATTATTTAGTACGGTCAGAAAATAATGTTTCCACAGCTGAATTGATGTTTGTTCTTTCAATCATAAAAAAAGAAATC
GAAAATACTTCTATTTATGGTCAATCTTCTCTGTTAGGCAATCTTCTCCACTTTAATTTTAATAATTACGAGTATACGTT
TAATACAAATAGAATCCAAAGTTGTTGCTCTACCTGTGCTACTTTCAATAATATATTATTTGAAGAGCAAAATATTCGGT
CAGTGAATATACTAAAGGAGCTGATGAGTAGTGATTAG

Upstream 100 bases:

>100_bases
GCAGGTTTTAACAAATCATATTTGGAAAAGCTTTTATATTTAGATGGAATAAATGATCACATTATATTTTCTAATATTTG
TGGAAAGGAATGATATTTTT

Downstream 100 bases:

>100_bases
TATACAAAATAATTTGGAATATAACAAGTTACGTTGGGAAACTTTGAGTGGAAATGTAACAGGAATATGGGAGAATAATA
AGTTCTTTCTAGGCTCTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKNFDIRIGTQTFDNDTEIILKRGVIHKNELVINKEESSKEFVSTFKELIKKKTIAISSEDAIYNDFETLTKFGFLTISK
NQTLKPLLVVEDALFDDMKSYFQEEIEILSSSEFLLKKDIRLLTENKDILQLTKLVDEKKEFLKNYNYIYLITNIPNISL
LRGFNKLMKETNCINTIAFFDNENVFVTCIEHGETGCYECLEQQILSHFDGVVTDYLVRSENNVSTAELMFVLSIIKKEI
ENTSIYGQSSLLGNLLHFNFNNYEYTFNTNRIQSCCSTCATFNNILFEEQNIRSVNILKELMSSD

Sequences:

>Translated_305_residues
MKNFDIRIGTQTFDNDTEIILKRGVIHKNELVINKEESSKEFVSTFKELIKKKTIAISSEDAIYNDFETLTKFGFLTISK
NQTLKPLLVVEDALFDDMKSYFQEEIEILSSSEFLLKKDIRLLTENKDILQLTKLVDEKKEFLKNYNYIYLITNIPNISL
LRGFNKLMKETNCINTIAFFDNENVFVTCIEHGETGCYECLEQQILSHFDGVVTDYLVRSENNVSTAELMFVLSIIKKEI
ENTSIYGQSSLLGNLLHFNFNNYEYTFNTNRIQSCCSTCATFNNILFEEQNIRSVNILKELMSSD
>Mature_305_residues
MKNFDIRIGTQTFDNDTEIILKRGVIHKNELVINKEESSKEFVSTFKELIKKKTIAISSEDAIYNDFETLTKFGFLTISK
NQTLKPLLVVEDALFDDMKSYFQEEIEILSSSEFLLKKDIRLLTENKDILQLTKLVDEKKEFLKNYNYIYLITNIPNISL
LRGFNKLMKETNCINTIAFFDNENVFVTCIEHGETGCYECLEQQILSHFDGVVTDYLVRSENNVSTAELMFVLSIIKKEI
ENTSIYGQSSLLGNLLHFNFNNYEYTFNTNRIQSCCSTCATFNNILFEEQNIRSVNILKELMSSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35380; Mature: 35380

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFDIRIGTQTFDNDTEIILKRGVIHKNELVINKEESSKEFVSTFKELIKKKTIAISSE
CCCCEEEECCCCCCCCHHHHHHCCCEECCCEEEECCCCHHHHHHHHHHHHHHHHHEECCC
DAIYNDFETLTKFGFLTISKNQTLKPLLVVEDALFDDMKSYFQEEIEILSSSEFLLKKDI
CCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RLLTENKDILQLTKLVDEKKEFLKNYNYIYLITNIPNISLLRGFNKLMKETNCINTIAFF
HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCHHEEEEEE
DNENVFVTCIEHGETGCYECLEQQILSHFDGVVTDYLVRSENNVSTAELMFVLSIIKKEI
ECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ENTSIYGQSSLLGNLLHFNFNNYEYTFNTNRIQSCCSTCATFNNILFEEQNIRSVNILKE
HCCCCCCCHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LMSSD
HHHCC
>Mature Secondary Structure
MKNFDIRIGTQTFDNDTEIILKRGVIHKNELVINKEESSKEFVSTFKELIKKKTIAISSE
CCCCEEEECCCCCCCCHHHHHHCCCEECCCEEEECCCCHHHHHHHHHHHHHHHHHEECCC
DAIYNDFETLTKFGFLTISKNQTLKPLLVVEDALFDDMKSYFQEEIEILSSSEFLLKKDI
CCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RLLTENKDILQLTKLVDEKKEFLKNYNYIYLITNIPNISLLRGFNKLMKETNCINTIAFF
HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCHHEEEEEE
DNENVFVTCIEHGETGCYECLEQQILSHFDGVVTDYLVRSENNVSTAELMFVLSIIKKEI
ECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ENTSIYGQSSLLGNLLHFNFNNYEYTFNTNRIQSCCSTCATFNNILFEEQNIRSVNILKE
HCCCCCCCHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LMSSD
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA