| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223712
Identifier: 226223712
GI number: 226223712
Start: 1129331
End: 1130206
Strand: Direct
Name: 226223712
Synonym: Lm4b_01114
Alternate gene names: NA
Gene position: 1129331-1130206 (Clockwise)
Preceding gene: 226223711
Following gene: 226223713
Centisome position: 38.77
GC content: 29.45
Gene sequence:
>876_bases ATGATCGACTATGAGAAAAAAGGCTTTTTTAACATCCACACATTGGTAAATAAAGATAATGCTAATATTTCTAATAGTGA TAATAAACATATTTATTCCCAGCTGATGTCTGGTAATGGCAATTCACCAATGCTAGGTTATTTATTAAATATGAATAAAC AAAACTTGAATGACTTCAAAAGTATCATGTTTTATAATGAATCTAATCTAGCTTCTTTAATTAACGAGGCAAGAGAAATG GAAGAATTAATAGATAGCTCAACTCTTTTTTTAAGTAAAACAAATAAAAAAATTAAAACCCATTTTTCTAAAGTGCTTGA GCAAAGACATAGTACAAGAAATTTTGTATACGAAACCATGGATTTATCAACATTCTCAAATATCATACAGTTTTCTTTTG GCCTTAGTACAAGAAAGTTGGTTTATAACGACTTACAATCAACCACCAGGCATTATTCTTCTGGGGGCGGTTTATATCCA ATTGATGTTTTTTTGTATATAAATAATATTTCTGGAATTGCCAAGGGTATATATAAATATCAGCCATACACGCATAGCTT GCATCCTCTAGATGTAGATAAAATTGATGTAGAGTCGTTTTTCGTAGGTGATAATATTGACACTTCTAATATGAATTTTT GTGTTTTCTTTGGATACTCTATTAATAAAAACTATGTGAAATATGGAGAACTATCTTTACTGAATACGTTTGTGGAACTC GGAGGAATATCGCACAACTTTGATTTAGTCTGTCATTCGGTTCACTATACAAGTTGTCCTATTGCAGGTTTTAACAAATC ATATTTGGAAAAGCTTTTATATTTAGATGGAATAAATGATCACATTATATTTTCTAATATTTGTGGAAAGGAATGA
Upstream 100 bases:
>100_bases CTAGCATGATGTTTATAGGGGTTATTATTTCTATGATACTAGCTATTGTTGTAGAAATTATTGTTTCGTTAAAAAACAGA CATAGAAAGGAAACAGCAAA
Downstream 100 bases:
>100_bases TATTTTTATGAAAAATTTTGATATTAGAATAGGAACGCAGACATTTGACAATGATACGGAAATCATTTTAAAAAGAGGGG TCATTCATAAGAACGAGCTC
Product: streptolysin S associated ORF sagB
Products: NA
Alternate protein names: SagB-Type Dehydrogenase Domain Protein; Streptolysin S Biosynthesis Protein B SagB; Nitroreductase; Streptolysin S Biosynthesis Protein; Nitroreductase Family Protein; Processing Protein; Streptolysin S Associated ORF SagB
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MIDYEKKGFFNIHTLVNKDNANISNSDNKHIYSQLMSGNGNSPMLGYLLNMNKQNLNDFKSIMFYNESNLASLINEAREM EELIDSSTLFLSKTNKKIKTHFSKVLEQRHSTRNFVYETMDLSTFSNIIQFSFGLSTRKLVYNDLQSTTRHYSSGGGLYP IDVFLYINNISGIAKGIYKYQPYTHSLHPLDVDKIDVESFFVGDNIDTSNMNFCVFFGYSINKNYVKYGELSLLNTFVEL GGISHNFDLVCHSVHYTSCPIAGFNKSYLEKLLYLDGINDHIIFSNICGKE
Sequences:
>Translated_291_residues MIDYEKKGFFNIHTLVNKDNANISNSDNKHIYSQLMSGNGNSPMLGYLLNMNKQNLNDFKSIMFYNESNLASLINEAREM EELIDSSTLFLSKTNKKIKTHFSKVLEQRHSTRNFVYETMDLSTFSNIIQFSFGLSTRKLVYNDLQSTTRHYSSGGGLYP IDVFLYINNISGIAKGIYKYQPYTHSLHPLDVDKIDVESFFVGDNIDTSNMNFCVFFGYSINKNYVKYGELSLLNTFVEL GGISHNFDLVCHSVHYTSCPIAGFNKSYLEKLLYLDGINDHIIFSNICGKE >Mature_291_residues MIDYEKKGFFNIHTLVNKDNANISNSDNKHIYSQLMSGNGNSPMLGYLLNMNKQNLNDFKSIMFYNESNLASLINEAREM EELIDSSTLFLSKTNKKIKTHFSKVLEQRHSTRNFVYETMDLSTFSNIIQFSFGLSTRKLVYNDLQSTTRHYSSGGGLYP IDVFLYINNISGIAKGIYKYQPYTHSLHPLDVDKIDVESFFVGDNIDTSNMNFCVFFGYSINKNYVKYGELSLLNTFVEL GGISHNFDLVCHSVHYTSCPIAGFNKSYLEKLLYLDGINDHIIFSNICGKE
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33309; Mature: 33309
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDYEKKGFFNIHTLVNKDNANISNSDNKHIYSQLMSGNGNSPMLGYLLNMNKQNLNDFK CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHH SIMFYNESNLASLINEAREMEELIDSSTLFLSKTNKKIKTHFSKVLEQRHSTRNFVYETM HEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEHHH DLSTFSNIIQFSFGLSTRKLVYNDLQSTTRHYSSGGGLYPIDVFLYINNISGIAKGIYKY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHC QPYTHSLHPLDVDKIDVESFFVGDNIDTSNMNFCVFFGYSINKNYVKYGELSLLNTFVEL CCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHH GGISHNFDLVCHSVHYTSCPIAGFNKSYLEKLLYLDGINDHIIFSNICGKE CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCC >Mature Secondary Structure MIDYEKKGFFNIHTLVNKDNANISNSDNKHIYSQLMSGNGNSPMLGYLLNMNKQNLNDFK CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHH SIMFYNESNLASLINEAREMEELIDSSTLFLSKTNKKIKTHFSKVLEQRHSTRNFVYETM HEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEHHH DLSTFSNIIQFSFGLSTRKLVYNDLQSTTRHYSSGGGLYPIDVFLYINNISGIAKGIYKY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHC QPYTHSLHPLDVDKIDVESFFVGDNIDTSNMNFCVFFGYSINKNYVKYGELSLLNTFVEL CCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHH GGISHNFDLVCHSVHYTSCPIAGFNKSYLEKLLYLDGINDHIIFSNICGKE CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA