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The map label for this gene is 226223710

Identifier: 226223710

GI number: 226223710

Start: 1128227

End: 1128976

Strand: Direct

Name: 226223710

Synonym: Lm4b_01112b

Alternate gene names: NA

Gene position: 1128227-1128976 (Clockwise)

Preceding gene: 226223709

Following gene: 226223711

Centisome position: 38.73

GC content: 28.67

Gene sequence:

>750_bases
ATGAGTTATTTATGGACAAGTATTAAAATGCAATTTAGAATTCCAGTATCTGTGTTTTTCTCATTATTATTTCCACTAAT
CATGATGTTCGCTATGGTTACTTCTTATGGAAACTTTGATATTGGTGAAGGTTATCATTTTGTAGATAAATATTTTTTGA
TTAGTACAGGGATGGGCATGTTACCAATAGCATTAATCAGTTTTCCAATCTGGCTTGGTGAAAGTGTTCAAAATAAAAGC
TATAAAAGATTAGAATATTTTGGATTGAGTGCACAGAAAATAATTGTTTCAGATGTATGTTCTTATATTTTGCTAACAGC
CTTAAGTATTTTTGTCAATATACTGTTTGGCTACTTGGTATATGGACTACATATCCCAGACTGGCAATATTTTATTGCTT
ATGTTTTGCAATGTCTGTATTGTAATCTAGTGCTTTTGATTTTTGGTGCCTTGCTTGCTTTAATTATTAAAAATCCCCGG
ATATTAATGCCAGTAGGAATGTGTTTATTATTTATGTTTTATATTTTTACAGGAACATTTTCATCTTTTTCGGAACTTCC
TAAATCATTTCAAGCAGTTGGTAATTTTTTACCTATGAAATATATAATGAATGATTTATTTAATGTTTGGACACAAAATA
AATTGTTCATCTCTAAGTTTTTAGCTTTAAACACGATATATGGAATCATCTTATCCTGCGCACTAATTGCTTTTTTGTTG
AGAAGCAGAAAAATAAAAATTAAATCATAA

Upstream 100 bases:

>100_bases
AAAACGTCACATACAACACAATAAAACAAAATATATATACAACTTATTTAGTTGCATATTTGCGCGGAACATCAAGCAGT
GAACAGGAGGTACTGATATA

Downstream 100 bases:

>100_bases
TTTATTATACTCAAGGTATAGAAAGGATTGTTTGTAATCTATGAAAAAAAAATTTAGTAATCCCACGTTTAGAATTATTG
CATCAATTGTTCTAGGGATT

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSYLWTSIKMQFRIPVSVFFSLLFPLIMMFAMVTSYGNFDIGEGYHFVDKYFLISTGMGMLPIALISFPIWLGESVQNKS
YKRLEYFGLSAQKIIVSDVCSYILLTALSIFVNILFGYLVYGLHIPDWQYFIAYVLQCLYCNLVLLIFGALLALIIKNPR
ILMPVGMCLLFMFYIFTGTFSSFSELPKSFQAVGNFLPMKYIMNDLFNVWTQNKLFISKFLALNTIYGIILSCALIAFLL
RSRKIKIKS

Sequences:

>Translated_249_residues
MSYLWTSIKMQFRIPVSVFFSLLFPLIMMFAMVTSYGNFDIGEGYHFVDKYFLISTGMGMLPIALISFPIWLGESVQNKS
YKRLEYFGLSAQKIIVSDVCSYILLTALSIFVNILFGYLVYGLHIPDWQYFIAYVLQCLYCNLVLLIFGALLALIIKNPR
ILMPVGMCLLFMFYIFTGTFSSFSELPKSFQAVGNFLPMKYIMNDLFNVWTQNKLFISKFLALNTIYGIILSCALIAFLL
RSRKIKIKS
>Mature_248_residues
SYLWTSIKMQFRIPVSVFFSLLFPLIMMFAMVTSYGNFDIGEGYHFVDKYFLISTGMGMLPIALISFPIWLGESVQNKSY
KRLEYFGLSAQKIIVSDVCSYILLTALSIFVNILFGYLVYGLHIPDWQYFIAYVLQCLYCNLVLLIFGALLALIIKNPRI
LMPVGMCLLFMFYIFTGTFSSFSELPKSFQAVGNFLPMKYIMNDLFNVWTQNKLFISKFLALNTIYGIILSCALIAFLLR
SRKIKIKS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28667; Mature: 28536

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCC
>Mature Secondary Structure 
SYLWTSIKMQFRIPVSVFFSLLFPLIMMFAMVTSYGNFDIGEGYHFVDKYFLISTGMGM
CCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHH
LPIALISFPIWLGESVQNKSYKRLEYFGLSAQKIIVSDVCSYILLTALSIFVNILFGYLV
HHHHHHHHHHHHCCHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLHIPDWQYFIAYVLQCLYCNLVLLIFGALLALIIKNPRILMPVGMCLLFMFYIFTGTF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
SSFSELPKSFQAVGNFLPMKYIMNDLFNVWTQNKLFISKFLALNTIYGIILSCALIAFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRKIKIKS
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA