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The map label for this gene is cap4C [H]

Identifier: 226223696

GI number: 226223696

Start: 1113891

End: 1114778

Strand: Reverse

Name: cap4C [H]

Synonym: Lm4b_01098

Alternate gene names: 226223696

Gene position: 1114778-1113891 (Counterclockwise)

Preceding gene: 226223718

Following gene: 226223691

Centisome position: 38.27

GC content: 35.25

Gene sequence:

>888_bases
ATGAGAGTAAAAAAAGCTGTAATTCCAGCTGCTGGTCTAGGCACGCGCTTTTTACCAGCAACAAAAGCAATGCCTAAAGA
AATCTTACCAATTGTGGATAAACCAACTATTCAATACATAGTAGAAGAAGCAGTAGCATCTGGCATAGAAGATATTTTAA
TTGTAACCGGTAAAGGTAAACGTGCTATCGAAGACCATTTTGATTCCGTTCCTGAACTTGAAAACAATCTACGGGAAAAA
AATAAACTTGAATTACTACATTTAGTAGAACAAACTACTAACATTAATTTGCACTTTATTCGTCAAGCGAAACCAAAAGG
ACTTGGTGATGCCATCCTTCAAGCAAAAGGCTTTGTGGGTAATGAACCATTTATCGTTATGTTAGGTGATGATATTGTTG
AATCCAAAATCCCTTGTTCCAAACAATTAATGAATCAATATGAAAAGACGCATAGTTCCGTCATTGGAGTCCAAACTGTC
CCTCACGAAGAGACATATCGTTATGGTATTATTGATCCAATTAATGAATATGATAAGAATTTATATAATGTGAAAGGTTT
TGTGGAAAAACCAGATCCTGCTAATGCACCGTCTGATTTAGCTATCCTTGGCCGTTACTTATTAACACCACAAATTTTCG
ACTTCTTAGAAACGCAAAAACCAGGTGCAGGAGGCGAAATTCAACTAACCGATGCAATCAATAGTCTAAATGAAGTACAA
CGTGTATTTGCTTATGACTTTGAAGGACAGCGTTTTGATGTTGGCGATAAATTCGGCTTTATCCAAACAACAATGCAATT
CGCTTTGAAGCATCCTGAAATCAAAGATGATGTGAAAGATCTGATTAACGACTTATATAACCAAATTCATAAAAAAGATA
AAAAATAA

Upstream 100 bases:

>100_bases
CATTTTATAACCTAAACCATTAAAAACTTGTAAACCCAAAGCCCCCTATGTATAATTAAGTGGGACTATATGAATATAGA
TTAGAAGGAGATTATTAAAT

Downstream 100 bases:

>100_bases
AAAAAGAGATGACAAATGAAAATTTTGTCATCTCTTTTTTACATGCATTTAAAAGTACAGCTTGTAACTTTTGGCAATAG
GATTTAAAGAATTTAAACCA

Product: UDP-glucose pyrophosphorylase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREK
NKLELLHLVEQTTNINLHFIRQAKPKGLGDAILQAKGFVGNEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTV
PHEETYRYGIIDPINEYDKNLYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEVQ
RVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKDDVKDLINDLYNQIHKKDKK

Sequences:

>Translated_295_residues
MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREK
NKLELLHLVEQTTNINLHFIRQAKPKGLGDAILQAKGFVGNEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTV
PHEETYRYGIIDPINEYDKNLYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEVQ
RVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKDDVKDLINDLYNQIHKKDKK
>Mature_295_residues
MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREK
NKLELLHLVEQTTNINLHFIRQAKPKGLGDAILQAKGFVGNEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTV
PHEETYRYGIIDPINEYDKNLYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEVQ
RVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKDDVKDLINDLYNQIHKKDKK

Specific function: May Play A Role In Stationary Phase Survival. [C]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=292, Percent_Identity=41.7808219178082, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1788355, Length=277, Percent_Identity=41.1552346570397, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1788351, Length=231, Percent_Identity=29.004329004329, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1790224, Length=233, Percent_Identity=29.1845493562232, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320148, Length=271, Percent_Identity=24.7232472324723, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 33188; Mature: 33188

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVASGIEDILIVTGKGK
CCCCHHCCCCCCCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
RAIEDHFDSVPELENNLREKNKLELLHLVEQTTNINLHFIRQAKPKGLGDAILQAKGFVG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCC
NEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTVPHEETYRYGIIDPINEYDKN
CCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCHHHHHHH
LYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEVQ
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
RVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKDDVKDLINDLYNQIHKKDKK
HHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVASGIEDILIVTGKGK
CCCCHHCCCCCCCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
RAIEDHFDSVPELENNLREKNKLELLHLVEQTTNINLHFIRQAKPKGLGDAILQAKGFVG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCC
NEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTVPHEETYRYGIIDPINEYDKN
CCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCHHHHHHH
LYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEVQ
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
RVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKDDVKDLINDLYNQIHKKDKK
HHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]