Click here to switch to the map view.

The map label for this gene is 226223676

Identifier: 226223676

GI number: 226223676

Start: 1086844

End: 1087116

Strand: Direct

Name: 226223676

Synonym: Lm4b_01078

Alternate gene names: NA

Gene position: 1086844-1087116 (Clockwise)

Preceding gene: 226223675

Following gene: 226223677

Centisome position: 37.31

GC content: 37.73

Gene sequence:

>273_bases
ATGGAATACAGTTATCCACTAAATCCAGACTGGACAACCGAAGAAATGACGATTGTTGTGCAATTTTTAGAAGCTATTGA
GCGAGCGTATGAAAAGGGCATAGATACGCTTGAGCTCAAAGAAAAATATCGAGCATTCAAACAAGTAGTCCCTGCCAAAG
GAGAAGAAAAACGGATTGGTATCGACTTTGAAAAAGCAAGTGGCTATTCGGCCTATAAAGTCATGCAACTTGTAAAAAAC
GCAACTACTAGTAAAATAAAAATGCAACCATAA

Upstream 100 bases:

>100_bases
TACATCTCTCAGACGATGAACAAAAAGAATTAAAACAAATCGCCACAAAAACCACCGAGAAATTGGAAGAATTGCAACTT
AACAAAGGAGGGATTAGTTA

Downstream 100 bases:

>100_bases
TTAAGAGGAGGAATTTTTTTCATGGATATTAGCCAAATTAAAGCAGAAGTAGTAACACCAGAAACAGGGATACACGTAGG
AGATCAAACTGCGCCAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKN
ATTSKIKMQP

Sequences:

>Translated_90_residues
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKN
ATTSKIKMQP
>Mature_90_residues
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKN
ATTSKIKMQP

Specific function: Unknown

COG id: COG4476

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0223 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007920
- ProDom:   PD062738 [H]

Pfam domain/function: PF05256 UPF0223 [H]

EC number: NA

Molecular weight: Translated: 10443; Mature: 10443

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
IDFEKASGYSAYKVMQLVKNATTSKIKMQP
CCCCCCCCCHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
IDFEKASGYSAYKVMQLVKNATTSKIKMQP
CCCCCCCCCHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA