Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223622
Identifier: 226223622
GI number: 226223622
Start: 1036078
End: 1037112
Strand: Direct
Name: 226223622
Synonym: Lm4b_01024
Alternate gene names: NA
Gene position: 1036078-1037112 (Clockwise)
Preceding gene: 226223621
Following gene: 226223623
Centisome position: 35.57
GC content: 33.33
Gene sequence:
>1035_bases TTGGTTATCTATCTATTAGCAGGTTTTTTTCTGCTTCTGTTCATTGTCTTGTCGTTTATAGATAGACGACGTATTAGCAA TGGGATTATTTTGACAATGGCACTATTTTTTTCTGTGCTTTCGGTGGTTTATGCTACTTTTTCAAAAGGGAATGAACTAC TCGTCTCGGTTATGGGGACGGTGTTACTTTTATTAGTTTTACTTATTCCATTTTTTGTTGTAGGGATAGCAACGATGCTC ATTGTAAATGGACGATTAATGTTGAAACGTGAAGGGCGTAAATTAGCCAATATGCTTCCTTTAATTATTGGTTTAGGCAT TTTAGCACTTATTATTACATGGTTCGGTAGTATTTTAAAAACAGGTAGTCCGATTCTTGGGATTGTGGTAGTTTTTATTG TGGCATTAGTTGGTTATTTTTCCTTTTTATTTTTATCGTTTCTTTTATCGACTTTTCTCTATCAATTTAATTTCCCAAGA TATAATCAAGATTTTCTGATTGTACTAGGAAGTGGTCTGATAGGCGGTGATAGAGTGCCTCCATTGCTTGCTAGTCGGTT GAATCGCGCTATTAAGTTCTACGACAAGCAATACGCCAAAAAAGGCAAACGAGCTACTTTTATCGTATCTGGTGGACAAG GTGCTAATGAAACTATTTCAGAAGCAGAAGCGATGCGAGGTTATTTAATAGAAAAAGGCATTGATGAAAATTTTATTATT ATGGAAGATCAATCCGTTAATACACTGCAAAATATGAAATTTTCAAAGGCAAAAATGGATGCAATTATGTCAAACTATAA TAGTTTATTTTCAACGAATAATTTTCATTTATTTAGAGCAGGTATTTATGCAAGAAAAGCGGGCTTGAAGAGTCAAGGGA TTGGTGCAAAAACAGCTTTATACTATATGCCTAATGCGTTAATTCGAGAATTTATTGCTATTACTGTAATGTATAAAAAA GTACATATGGTCTTACTTGGTTTATTACTATTGTTTTTTGCGTTTTTAGCGATTATAGGTGTTACTTTTAGATAG
Upstream 100 bases:
>100_bases GACCTAGACAATTTTGTTGTCTAGGTCTTTTTATGTTGTGAAATAGCCTCCGCCCAAGTATAATTGGAAATACAGTTAGT TTTAAAAGGGGGCAACAAGA
Downstream 100 bases:
>100_bases GAGGTTAGCCTGATGGAGAAAATTGGATTTGTTGGTACAGGCGTAATGGGTTCGAGTATGGCAGGGCATTTACTGGAGGC TGGTTATGAAGTATTGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATML IVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPR YNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFII MEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKK VHMVLLGLLLLFFAFLAIIGVTFR
Sequences:
>Translated_344_residues MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATML IVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPR YNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFII MEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKK VHMVLLGLLLLFFAFLAIIGVTFR >Mature_344_residues MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATML IVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPR YNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFII MEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKK VHMVLLGLLLLFFAFLAIIGVTFR
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38401; Mature: 38401
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGT CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILK HHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCC PLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFII HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEE MEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTAL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHHHHH YYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGT CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILK HHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCC PLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFII HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEE MEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTAL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHHHHH YYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA