Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226223617

Identifier: 226223617

GI number: 226223617

Start: 1031021

End: 1031812

Strand: Direct

Name: 226223617

Synonym: Lm4b_01019

Alternate gene names: NA

Gene position: 1031021-1031812 (Clockwise)

Preceding gene: 226223614

Following gene: 226223620

Centisome position: 35.4

GC content: 32.2

Gene sequence:

>792_bases
ATGTTAGAAAAAAACTACAAATTTTTACTTTGGATTTATATATTCTGGTTTTTAGGTAGCGTTTTGTTAGTATCCTTACA
CATTATTCCACCAGAGCTAACTGCAGTGCAATCATTATTTTTAGTATTTACTGGTGTTTTTGCGGCTGTTTTCTTTATTA
TGCAATATGGTAAATGGCTTGGTTCTGCTATAACGTTACTTATATTTGTTGTCAGTACTTGTATTGAATGGATGCAACTA
AGTTATACAGATGAATATATTGGTTCAACGTTAGGTGGAAGTGTTTACGGAATTCCTATTACAATGGGCTTTATTTGGGT
CGGAATGGTTGCCGGGACGCATATTATCGCTCGGGAAATTACATTGAAAATTAATATTGACTGGATTCGTGGAGGTATTT
ATTCGTTTATCGCAGCAACGATGGTAATGATTTTTGAGGTTTTAATCGAACCAATTACAATGCAATCAAAACAACTTTAC
ATTACGCAAAACGGCTTCACGATTTTGCAGTTATCTGACTTTATTAATTGGTGGCTTTTAGGACTTATTTTACATTTAAT
GATTTACTTTATTTTGAGTTTAACGGATAGTTGGGAGCGTCTTAAATATCCAGATTTAAAATCAGAAATTGTCATCGTTT
ATTGGATTATTATTGCCTTTTTCGTATTTTTGTCCTTTTACCTTGATTTATGGACATCTATTGCGATTATTATCGTTTCT
AATATTATTTTCACTGCTTGTTATTTTTTCAGTTTGGAAAAAGAAGCGCAGCCTAAAAAGAAATCCGAATGA

Upstream 100 bases:

>100_bases
AAACAAATGAAATCGTTTGGCAACAATTAAACAAAAGATAAGATAAAAGTTGTGGAATTTAATAAATCCTATATAATGAA
AAAATAGGAGTGGTTCATAG

Downstream 100 bases:

>100_bases
TTACTCGGATTTCTTTTCTTTTTGTAAAAATTTCTGGGTTGCGATTTGCGCATTTTCAATAATAAATGGAAGCGAGCTAC
CCGACATCGCGCCTGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL
SYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY
ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS
NIIFTACYFFSLEKEAQPKKKSE

Sequences:

>Translated_263_residues
MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL
SYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY
ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS
NIIFTACYFFSLEKEAQPKKKSE
>Mature_263_residues
MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL
SYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY
ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS
NIIFTACYFFSLEKEAQPKKKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30448; Mature: 30448

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHEEEEE
TLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHH
GLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS
HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIIFTACYFFSLEKEAQPKKKSE
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHEEEEE
TLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHH
GLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS
HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIIFTACYFFSLEKEAQPKKKSE
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA