Click here to switch to the map view.

The map label for this gene is 226223616

Identifier: 226223616

GI number: 226223616

Start: 1030264

End: 1030875

Strand: Reverse

Name: 226223616

Synonym: Lm4b_01018

Alternate gene names: NA

Gene position: 1030875-1030264 (Counterclockwise)

Preceding gene: 226223618

Following gene: 226223615

Centisome position: 35.39

GC content: 36.11

Gene sequence:

>612_bases
TTGAAAAGCATCAAGATCGATTATAAACTTGTACTGGGCCTTGTTTTATGCGCCCTACTCGTTATACTAACATATCAGTT
CCCACGTGTTTTTTGGTATTTATATGGAGCTGGGATGTTATTTTTACTTAGTTTTGTGATTTTTAATGATGATTTAAAAA
AAGAGTTTTCGTTCGTTAAAGGCATTTTGCCAGGTATTTTTTCCGGAATTGTCCTTTATATTATTTTTTACATAGGCGCT
TTTATTATTAAAGTAATGCCAGGCGGTCTAGAAAATTCTGTAGAAGCTGCTTTTAATAAGTATTCGACGCATTCTTTGAT
AATTTGGCTACTGCTTATCGTGGCCATTATCCCTGGAGAAGAAATTTTCTGGCGCGGCTTCGTATTAAAACGATTAAACC
ATTATTTCAATCCTTGGTTTTCGAATGTTTTTGCAGCGTTACTATGTATGGTAATGATGTTCCCAAGTGGCAACTTTGCA
GCGATTATCGGTATCTTTGTCGCTTCGCTCGTATGGAATATCATGTACTCCTATCGCCCAAGCCTACTCATGCTATATTT
ATCGCATCTAACCTTTGCGTTTTTGTTACTCGCAGCCTTACCAATTTATTAA

Upstream 100 bases:

>100_bases
CCACAACTTTTATCTTATCTTTTGTTTAATTGTTGCCAAACGATTTCATTTGTTTTAAAGTAGTATGAGAAGTATTTGTT
AAGAAGAGGTGTAAAGTATT

Downstream 100 bases:

>100_bases
AAATAGCACAAAAACGCTCCTTTTTAGGGGTGTTTTTTTTATAAAAAAAAATAAGCAAAATACTTGAAAGTCAAAATAGG
TCAGTATATAATAAAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLSFVIFNDDLKKEFSFVKGILPGIFSGIVLYIIFYIGA
FIIKVMPGGLENSVEAAFNKYSTHSLIIWLLLIVAIIPGEEIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFA
AIIGIFVASLVWNIMYSYRPSLLMLYLSHLTFAFLLLAALPIY

Sequences:

>Translated_203_residues
MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLSFVIFNDDLKKEFSFVKGILPGIFSGIVLYIIFYIGA
FIIKVMPGGLENSVEAAFNKYSTHSLIIWLLLIVAIIPGEEIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFA
AIIGIFVASLVWNIMYSYRPSLLMLYLSHLTFAFLLLAALPIY
>Mature_203_residues
MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLSFVIFNDDLKKEFSFVKGILPGIFSGIVLYIIFYIGA
FIIKVMPGGLENSVEAAFNKYSTHSLIIWLLLIVAIIPGEEIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFA
AIIGIFVASLVWNIMYSYRPSLLMLYLSHLTFAFLLLAALPIY

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23249; Mature: 23249

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLSFVIFNDDLKKEFSFVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILPGIFSGIVLYIIFYIGAFIIKVMPGGLENSVEAAFNKYSTHSLIIWLLLIVAIIPGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFAAIIGIFVASLVWNIMYSYRP
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SLLMLYLSHLTFAFLLLAALPIY
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLSFVIFNDDLKKEFSFVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILPGIFSGIVLYIIFYIGAFIIKVMPGGLENSVEAAFNKYSTHSLIIWLLLIVAIIPGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFAAIIGIFVASLVWNIMYSYRP
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SLLMLYLSHLTFAFLLLAALPIY
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA