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The map label for this gene is ykoY [H]

Identifier: 226223609

GI number: 226223609

Start: 1022727

End: 1023494

Strand: Direct

Name: ykoY [H]

Synonym: Lm4b_01011

Alternate gene names: 226223609

Gene position: 1022727-1023494 (Clockwise)

Preceding gene: 226223608

Following gene: 226223610

Centisome position: 35.11

GC content: 39.97

Gene sequence:

>768_bases
GTGGATACAGCAATGATTTTAGAGTACGGTTGGGTGTTACTTGTCCTAATCGGTCTTGAGGGGATTTTAGCAGCAGATAA
TGCAGTGGTTATGGCTGTGATGGTCAAACATCTCCCAGATAAACAACAGAAAAAAGCGTTATTTTACGGATTGATGGGTG
CCTTTGTTTTCCGTTTTGGCGCATTATTCTTAATTTCCTTTTTGGCAAATGTTTGGCAAGTTCAAGCGCTTGGTGCCGCA
TATTTACTATATATCGCTATTAGTCACATTTGGAAACATGCAAAAGGAAAAGACGGAGAAAAAGAGAAGAAGGAAAAAGC
TGGCTCTGGTTTTTGGATGACAGTTCTAAAAGTAGAGATTGCCGATATTGCGTTTGCGATTGATTCCATGCTTGCGGCAG
TAGCCCTTGCTATTACTCTTCCAGAAACAGGATGGGGACACATTGGGGGAATTGATACAGGGCAATTTGCGATTATGTTC
TTAGGTGGACTTGTCGGCCTAATTATTATCCGTTTTGCAGCAACTCAATTTGTTAAATTACTAAAAAGCTATCCAAGTCT
CGAAACAGCCGCATTTTTAATTGTTGGTTGGGTAGGCGTGAAGCTAGTTATTTATACATTAGCACACCCTAGTCTTGGTG
TAATTCCACACAGCTTCCCTGAGTCAACACTTTGGAAATTAATTTTCTGGGGCGTGATGATTCTAATTATTCTATGGGGA
TGGTTCGTTTCCTATCGTAGTAAGAAAAAAGCAGAAACAACTAAATAA

Upstream 100 bases:

>100_bases
GTTAGCGAGACCTTTGCCTTTACGGGCAGGTCTCGCTTTTTTGTTTCTTCAAAATAGGAGATCTTTGACATTTTAATAGA
ACAAAGGAGGAAAAGAATTA

Downstream 100 bases:

>100_bases
TTTCTAATAGACCAGAAGTGCATATTTGTACTTCTGGTTTTACATACAACCAGATGCTGAAAACATAATTTTATGATAGA
GTAGAAGGATGGTGAATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAA
YLLYIAISHIWKHAKGKDGEKEKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMF
LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHSFPESTLWKLIFWGVMILIILWG
WFVSYRSKKKAETTK

Sequences:

>Translated_255_residues
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAA
YLLYIAISHIWKHAKGKDGEKEKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMF
LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHSFPESTLWKLIFWGVMILIILWG
WFVSYRSKKKAETTK
>Mature_255_residues
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAA
YLLYIAISHIWKHAKGKDGEKEKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMF
LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHSFPESTLWKLIFWGVMILIILWG
WFVSYRSKKKAETTK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI1788119, Length=206, Percent_Identity=23.3009708737864, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022493
- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 28122; Mature: 28122

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFG
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALFLISFLANVWQVQALGAAYLLYIAISHIWKHAKGKDGEKEKKEKAGSGFWMTVLKVEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHH
ADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMFLGGLVGLIIIRFAATQFVKL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHSFPESTLWKLIFWGVMILIILWG
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WFVSYRSKKKAETTK
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]