| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is dltD
Identifier: 226223589
GI number: 226223589
Start: 1003377
End: 1004651
Strand: Reverse
Name: dltD
Synonym: Lm4b_00991
Alternate gene names: 226223589
Gene position: 1004651-1003377 (Counterclockwise)
Preceding gene: 226223590
Following gene: 226223584
Centisome position: 34.49
GC content: 36.16
Gene sequence:
>1275_bases ATGAAAAAAAAGCTGTGGATGACATTTGGGCCTTTACTGGTCGCATTCGCGGTTTTCCTTTTCGTTCTATTCGGACCTAG TAGCTTATTCTCTAAAGTTTCTTCTGAAACCGTAGAGAAAAGCGCTACATCAATGAACGAATCCGTCATCCAAGGCTTAG ACATCCAGAAAAAAGCTTTACAAGAAGGAAACTATTTACCAATTTATGGTTCTTCAGAGCTTTCCCGCGTCGACCCATTT CATCCTAGCGTAGTCTCAAAAAAATACAATCAGGGCTATACACCATTTTTACTTGGTCGCCCAGGTACACAATCATTAAG TCATTTCTTAGACGTAAATGCACTTGGTGATGATTTAAAAGGAAAAAAAGTAGCGGTAGTTTTATCTCCACAATGGTTCC AACCTAAAGGCGTTTCTGACCCATCATTTGGTGCCAATTTTTCCCCTCTTCATGCATATAAATTCGCATTAGAAGATACG AAAAATACGCCTGAACGTCGCTATGCAGCTAAACGTTTATTATCTTTTCAAGTAGTTCAAAGTGACTCTACATTAAAAAA ATTACTCGAAAACATTGTCGCAAAAGGGCCTAAAAAACCTCATGATCCAAAACTTCTAAACATTACTGGTAATATCGAAC TGAAGATTTTGGAACGTAAAGATGATTTAGAATCAAAATACATCATTGGTTCCAAACAAGATCGCGTAAACAAAGGCCTA AAAGAACTTCCAGAAACTTTAGATTACCAAAAACTAGATGAATTGGCTAAAGAAACTGGGGAGAGAAGTACTGGTAATAA CCCTTTTCAAGTCAAAGAACATTATTACCAAAAGAAAATCAAACCAATTGAAGGTAAATTAAAAAATAGCCGCAAAGATT TACGTTATGACCAATCTCCTGAGTTTGCTGATTTACAGCTACTAATGGATGCTTTCAAAAAGGCTGGTGCAGATGTCATT TTCATTAACCCGCCTATCAATGGAAAATGGATTGATTACATTGGTATGGACAAACAAGGTTTAGATGACTATTATGCTAA AACAAAAGAACAAATTGAGAGTCAAGGTTTCCGTTACTACTCTCTAGAAGAATATCAAAATGATGCTTTTTTCTTAGAAG ATCCGATTCATTTAAGCTGGCGCGGTTGGGTAAAAATCGACCAAGTATTAGCAGACTTCGTTAAAGAACCAATGCAAACA AACTATAAACCAACACCAAAAGAATATTACTTTAAAGAACATCCAGAAAATGGACCAAAAAAAGACCGTAAGTAG
Upstream 100 bases:
>100_bases TTGAAGAAAAATTAGATATCACTGTACCTGTTTCCGAATTTGACCGCGACGAATGGGCTACTCCTGAAATGATTATTACA CAACTCGAGGCGCTAAAATA
Downstream 100 bases:
>100_bases TTTTTAACTACTTACGGTCTTTTTTCTTTAAAATCCAATAATATGATAACCGCTATCTACATGAATTACTTCGCCTGTAA CGCCTCGAGATAAATTACTG
Product: DltD protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATSMNESVIQGLDIQKKALQEGNYLPIYGSSELSRVDPF HPSVVSKKYNQGYTPFLLGRPGTQSLSHFLDVNALGDDLKGKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDT KNTPERRYAAKRLLSFQVVQSDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILERKDDLESKYIIGSKQDRVNKGL KELPETLDYQKLDELAKETGERSTGNNPFQVKEHYYQKKIKPIEGKLKNSRKDLRYDQSPEFADLQLLMDAFKKAGADVI FINPPINGKWIDYIGMDKQGLDDYYAKTKEQIESQGFRYYSLEEYQNDAFFLEDPIHLSWRGWVKIDQVLADFVKEPMQT NYKPTPKEYYFKEHPENGPKKDRK
Sequences:
>Translated_424_residues MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATSMNESVIQGLDIQKKALQEGNYLPIYGSSELSRVDPF HPSVVSKKYNQGYTPFLLGRPGTQSLSHFLDVNALGDDLKGKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDT KNTPERRYAAKRLLSFQVVQSDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILERKDDLESKYIIGSKQDRVNKGL KELPETLDYQKLDELAKETGERSTGNNPFQVKEHYYQKKIKPIEGKLKNSRKDLRYDQSPEFADLQLLMDAFKKAGADVI FINPPINGKWIDYIGMDKQGLDDYYAKTKEQIESQGFRYYSLEEYQNDAFFLEDPIHLSWRGWVKIDQVLADFVKEPMQT NYKPTPKEYYFKEHPENGPKKDRK >Mature_424_residues MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATSMNESVIQGLDIQKKALQEGNYLPIYGSSELSRVDPF HPSVVSKKYNQGYTPFLLGRPGTQSLSHFLDVNALGDDLKGKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDT KNTPERRYAAKRLLSFQVVQSDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILERKDDLESKYIIGSKQDRVNKGL KELPETLDYQKLDELAKETGERSTGNNPFQVKEHYYQKKIKPIEGKLKNSRKDLRYDQSPEFADLQLLMDAFKKAGADVI FINPPINGKWIDYIGMDKQGLDDYYAKTKEQIESQGFRYYSLEEYQNDAFFLEDPIHLSWRGWVKIDQVLADFVKEPMQT NYKPTPKEYYFKEHPENGPKKDRK
Specific function: Could be responsible for the transfer of D-alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains [H]
COG id: COG3966
COG function: function code M; Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006998 - InterPro: IPR007002 - InterPro: IPR006999 - InterPro: IPR013830 [H]
Pfam domain/function: PF04914 DltD_C; PF04918 DltD_M; PF04915 DltD_N [H]
EC number: NA
Molecular weight: Translated: 48560; Mature: 48560
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATSMNESVIQGLDIQKKAL CCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QEGNYLPIYGSSELSRVDPFHPSVVSKKYNQGYTPFLLGRPGTQSLSHFLDVNALGDDLK HCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCC GKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDTKNTPERRYAAKRLLSFQVVQ CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC SDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILERKDDLESKYIIGSKQDRVNKGL CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEECCCCHHHHHHHH KELPETLDYQKLDELAKETGERSTGNNPFQVKEHYYQKKIKPIEGKLKNSRKDLRYDQSP HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCC EFADLQLLMDAFKKAGADVIFINPPINGKWIDYIGMDKQGLDDYYAKTKEQIESQGFRYY CHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEE SLEEYQNDAFFLEDPIHLSWRGWVKIDQVLADFVKEPMQTNYKPTPKEYYFKEHPENGPK EHHHHCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC KDRK CCCC >Mature Secondary Structure MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATSMNESVIQGLDIQKKAL CCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QEGNYLPIYGSSELSRVDPFHPSVVSKKYNQGYTPFLLGRPGTQSLSHFLDVNALGDDLK HCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCC GKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDTKNTPERRYAAKRLLSFQVVQ CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC SDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILERKDDLESKYIIGSKQDRVNKGL CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEECCCCHHHHHHHH KELPETLDYQKLDELAKETGERSTGNNPFQVKEHYYQKKIKPIEGKLKNSRKDLRYDQSP HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCC EFADLQLLMDAFKKAGADVIFINPPINGKWIDYIGMDKQGLDDYYAKTKEQIESQGFRYY CHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEE SLEEYQNDAFFLEDPIHLSWRGWVKIDQVLADFVKEPMQTNYKPTPKEYYFKEHPENGPK EHHHHCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC KDRK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 7797557 [H]