Click here to switch to the map view.

The map label for this gene is 226223584

Identifier: 226223584

GI number: 226223584

Start: 999454

End: 999921

Strand: Reverse

Name: 226223584

Synonym: Lm4b_00986

Alternate gene names: NA

Gene position: 999921-999454 (Counterclockwise)

Preceding gene: 226223589

Following gene: 226223583

Centisome position: 34.33

GC content: 39.53

Gene sequence:

>468_bases
ATGATTCTAACATTACTTCAAAACGGCGATTACGAAACTGCGCGCACTCAAGCACTTGCTGAATTAAAAAACAACTCCGA
TAACGCAGAACTTCATTATTATGCAGCATGGGCCCATGACGCACTCGGTAAAGAAGATGCTGCAATCCCCTTTTATGAGA
AAGCCATACAGCTCGGTCTTCCAGTTGATTCTCGTAAAGAAGCATATATAGGCCTTGGTAGTACTTACCGTATTACAGGT
CAGCCCGAAAAAGCTAGCCTGCTTTTCCAAACCGCTTTACAAGAATTTCCAGATAATAATGCCTTGCGCACTTTTTCAGT
TATGGCTAAATACAATCAAGGCTTAGAAAAAGAAGCTTTGCAGGAAGCCTTAATACTCTTGACACAAACAACGAGTGATG
AAGACATTTTAAGTTACAAGAAAGCAATTCAATTTTATGCGCAAGATTTAGATGCGACATTTCATTAA

Upstream 100 bases:

>100_bases
ACAAAAGCAGTTAATCCACCTTGCTTAAAGTAACCTTTTTTTCAATCCCGTGGTAAAATAAAACCGAAGCATTCAAACGA
CAACTAAAAGGAGGATGAAA

Downstream 100 bases:

>100_bases
AGGGAGCTGAACTATCATGGTCAAAGAACTAGAAATCGAATTTCGTAACCTACTAACCAAAGAAGAATACGATACATTAA
TAGAAAGTTTTCGAGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Repeat Protein; Tetratricopeptide Tpr_2 Repeat Protein; Chloramphenicol Acetyltransferase

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGKEDAAIPFYEKAIQLGLPVDSRKEAYIGLGSTYRITG
QPEKASLLFQTALQEFPDNNALRTFSVMAKYNQGLEKEALQEALILLTQTTSDEDILSYKKAIQFYAQDLDATFH

Sequences:

>Translated_155_residues
MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGKEDAAIPFYEKAIQLGLPVDSRKEAYIGLGSTYRITG
QPEKASLLFQTALQEFPDNNALRTFSVMAKYNQGLEKEALQEALILLTQTTSDEDILSYKKAIQFYAQDLDATFH
>Mature_155_residues
MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGKEDAAIPFYEKAIQLGLPVDSRKEAYIGLGSTYRITG
QPEKASLLFQTALQEFPDNNALRTFSVMAKYNQGLEKEALQEALILLTQTTSDEDILSYKKAIQFYAQDLDATFH

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17399; Mature: 17399

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGKEDAAIPFYEKAIQLGL
CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHCC
PVDSRKEAYIGLGSTYRITGQPEKASLLFQTALQEFPDNNALRTFSVMAKYNQGLEKEAL
CCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH
QEALILLTQTTSDEDILSYKKAIQFYAQDLDATFH
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGKEDAAIPFYEKAIQLGL
CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHCC
PVDSRKEAYIGLGSTYRITGQPEKASLLFQTALQEFPDNNALRTFSVMAKYNQGLEKEAL
CCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH
QEALILLTQTTSDEDILSYKKAIQFYAQDLDATFH
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA