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The map label for this gene is acrR [C]

Identifier: 226223545

GI number: 226223545

Start: 963729

End: 964385

Strand: Direct

Name: acrR [C]

Synonym: Lm4b_00945

Alternate gene names: 226223545

Gene position: 963729-964385 (Clockwise)

Preceding gene: 226223544

Following gene: 226223547

Centisome position: 33.09

GC content: 38.66

Gene sequence:

>657_bases
GTGGATGCAGAAGGAGACATTATCCGTCAAATGCTTGATTTAACGGAAAAAGAAACAAAGATGAGTGAAAAGCAGCGCCG
AATTGTCGCTGCTTCCATCGAACTGTTTGCAGAAAAAGGCTATGCCGGAACTTCAACGAATGAAATTGCTAAAAAAGCTG
GGGTCGCAGAAGGCACCATTTTTAGACACTATAAAACGAAAAAAGATTTACTAATGGCGATTACCATGCCAACGCTTATC
GGTGGTGTGATACCATTTTTAGCACAAAGCTTTGTCAAAGAAGTGTTTGAAAGTGAGTATCCAGATTTTCAGTCATTCAT
TCGGGAAATCATCGTTAATCGCTTTGATTTTGCCAAAGAGAATGGTAAGGTCATCAAAATTTACTTTATGGAACTGTTTT
ATCACGATGAGTTAAGAATACAGTTTTCAGAAATTTTTATGACACATGTCAAAGGGCAATTTGATCAAATGATTGATTAT
TATAAAGAGCGCGGGGAAATTGTTGATATGCCGAACAGCACGATTATGCGCGCTCTTATCACGAATATTGTCGGATTTAT
GCTAACAAGATTTGTCGTGATGCCCGACGTGGAGTGGGATGATGCCAAAGAAATTGATGATACGGTGGCGTATATTATGA
GAGGTTTAGGTAAGTAA

Upstream 100 bases:

>100_bases
TTCTACATTTTACTAGGATTTGTGCTCGTATTTGTTATATTAAATATTTTTGCTTTGAAAAAATACCGCAAAGTTTAAAT
GAAACAGGAGGAGATAAGAC

Downstream 100 bases:

>100_bases
AAAAGAGTCCAGATATTCTGGACTCTTTTTCTCATTTATCGGATGAATCAGTTGATTTTTTCTTATTGTAATTGTATTTA
CTTGGATCCACTTTTTTGAA

Product: transcription regulator (TetR/AcrR family)

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcription Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulatory Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGTSTNEIAKKAGVAEGTIFRHYKTKKDLLMAITMPTLI
GGVIPFLAQSFVKEVFESEYPDFQSFIREIIVNRFDFAKENGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDY
YKERGEIVDMPNSTIMRALITNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK

Sequences:

>Translated_218_residues
MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGTSTNEIAKKAGVAEGTIFRHYKTKKDLLMAITMPTLI
GGVIPFLAQSFVKEVFESEYPDFQSFIREIIVNRFDFAKENGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDY
YKERGEIVDMPNSTIMRALITNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK
>Mature_218_residues
MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGTSTNEIAKKAGVAEGTIFRHYKTKKDLLMAITMPTLI
GGVIPFLAQSFVKEVFESEYPDFQSFIREIIVNRFDFAKENGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDY
YKERGEIVDMPNSTIMRALITNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25237; Mature: 25237

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGTSTNEIAKKAGVAEGTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHH
FRHYKTKKDLLMAITMPTLIGGVIPFLAQSFVKEVFESEYPDFQSFIREIIVNRFDFAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
NGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDYYKERGEIVDMPNSTIMRALI
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHH
TNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGTSTNEIAKKAGVAEGTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHH
FRHYKTKKDLLMAITMPTLIGGVIPFLAQSFVKEVFESEYPDFQSFIREIIVNRFDFAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
NGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDYYKERGEIVDMPNSTIMRALI
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHH
TNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA