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The map label for this gene is ycgQ [H]

Identifier: 226223541

GI number: 226223541

Start: 959905

End: 960744

Strand: Direct

Name: ycgQ [H]

Synonym: Lm4b_00941

Alternate gene names: 226223541

Gene position: 959905-960744 (Clockwise)

Preceding gene: 226223540

Following gene: 226223542

Centisome position: 32.96

GC content: 35.36

Gene sequence:

>840_bases
ATGTTTCGCGTTTTTATTTTATTTGGATTTGGTTTTTATTTGATGCAGTTACATATTTCTGGTGATATCAGTAAATATAT
AAATATGAAGTACGCTTATTTATCTTTTTCTGCGATGATAGCCGCATTTCTACTTGCGATTATTCAGCTCATTATGGTGT
TTCGCGATGAAGATATTGGTGCAAAAACAGAGCATATGGGACACACCCATGATGGCGAAAATACCATTTTGAAAAAAATT
ATGGTGTATGGTTTACTTTCTTACGCCTTAATTGCAGGTTTTCTTTTCCCCGTCGCAACGCTTGATTCGACCATTGTTTC
GGCAAAAGGATTTCATTTCCCGAAAAACAATGCAGCTGGCGACGACCCATACGCTCAAAATCAATTTTTAAGACCAGATA
CGAGTGGCTATTTTGGGGAAACCGATTATGAAAAAATGATGGCGAAAGAAAAAGCGGAAATCATCGATCAAAACCCAATC
AAAGTCAATGATAGTAATTACTTAATGACGATGGAAATTCTTTATAATTATCCAGGGGAGTTTACTGGGAAACAAATCGA
ATTTACCGGTTTTGTTTATAATGATGAAGTCACCCAAGATAATAACTTGTTTTTGTTCCGTTTTGGAATAATTCACTGTG
TTGCCGATTCTGGTGTGTTTGGAATGCTTGTTCAAATGCCCGAAAAAACCGATTTGAAAAACGATACATGGCTTACAGTA
AAAGGAACCATCACCCAAGAATATTATTCTCCGTTCAAAATGAACATCCCGTCTGTACAAGTAGAAAGCTATAAAGAAGT
AGCAAAACCAAAATCAGTTTATGTTTATCGTAAATATTAA

Upstream 100 bases:

>100_bases
AGGAGCATTTAAAGCAAAATTTGTCTTATTAATTGTTACTAGTGTAACGATTGTTGTCTTTTTATACGCCTTAGTTATTT
AACCGAAAGAAGGTGAAAGT

Downstream 100 bases:

>100_bases
ATCGCTACTTGCGGATTTATGCAGCTTGCGTTATCCTTAAATAAAGCTGTTTACGTTTTCACGAATGAATAAAAGGATGG
AACATTGAATGAATGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLAIIQLIMVFRDEDIGAKTEHMGHTHDGENTILKKI
MVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPI
KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY

Sequences:

>Translated_279_residues
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLAIIQLIMVFRDEDIGAKTEHMGHTHDGENTILKKI
MVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPI
KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY
>Mature_279_residues
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLAIIQLIMVFRDEDIGAKTEHMGHTHDGENTILKKI
MVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPI
KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY

Specific function: Unknown

COG id: COG3689

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0703 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015402 [H]

Pfam domain/function: PF09323 DUF1980 [H]

EC number: NA

Molecular weight: Translated: 31958; Mature: 31958

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLAIIQLIMVFRDEDIG
CEEEEEEHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAG
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPIKVNDSNYLMTMEILYNYPGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCC
FTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
CCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHHHCCCHHHHEEECCCCCCCCCCCEEEE
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY
EEEEEHHHCCCEECCCCCEEHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLAIIQLIMVFRDEDIG
CEEEEEEHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAG
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPIKVNDSNYLMTMEILYNYPGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCC
FTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
CCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHHHCCCHHHHEEECCCCCCCCCCCEEEE
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY
EEEEEHHHCCCEECCCCCEEHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]