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The map label for this gene is licB [H]

Identifier: 226223534

GI number: 226223534

Start: 951484

End: 951789

Strand: Direct

Name: licB [H]

Synonym: Lm4b_00934

Alternate gene names: 226223534

Gene position: 951484-951789 (Clockwise)

Preceding gene: 226223533

Following gene: 226223535

Centisome position: 32.67

GC content: 37.25

Gene sequence:

>306_bases
ATGAAAAACATTTTACTCATTTGTGGGTCAGGAGCTTCAAGTGGATTCATGGCAGCAGCAATCAGAAAAGCAGCAAAAAA
ACGTGGAGAACAAGTGACGGTGAAAGCAGCCAGTGAGTCACAAATAGATGAAAGAATTAATGAAATTGATTACTTATTAA
TCGGGCCGCACTTAGCTTATATGCTGGATGACTTAAAACAAAAAGTAGCCGATAAAAATGTTTTAGTATCAATTATTCCG
CAAGCAACTTATGGCACACTTAACGGTGAAAAAGCACTCGATCTCATTTTAACTATGGAGGGATAA

Upstream 100 bases:

>100_bases
CTTTTTTATGCAGTTTCCTACCAGTAGGAAAAAAACATATTTGTAAGCGGATTCAGCTGTTTATATAATAAAAGTAAGTT
AAGGAAAGGGAGGATACAAA

Downstream 100 bases:

>100_bases
CACGATGAACAACAAAGTGATGGATTTTATGACAAATAAATTTGCTCCAAAAGTAAATAAAGTTGTTAAAAATCCTTGGG
TATCAGCAATTCAAGATGCA

Product: PTS system, IIB component

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKNVLVSIIP
QATYGTLNGEKALDLILTMEG

Sequences:

>Translated_101_residues
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKNVLVSIIP
QATYGTLNGEKALDLILTMEG
>Mature_101_residues
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKNVLVSIIP
QATYGTLNGEKALDLILTMEG

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10892; Mature: 10892

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAY
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCEEEECHHHHH
MLDDLKQKVADKNVLVSIIPQATYGTLNGEKALDLILTMEG
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAY
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCEEEECHHHHH
MLDDLKQKVADKNVLVSIIPQATYGTLNGEKALDLILTMEG
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]