Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is gpmA1 [H]
Identifier: 226223527
GI number: 226223527
Start: 944645
End: 945319
Strand: Direct
Name: gpmA1 [H]
Synonym: Lm4b_00927
Alternate gene names: 226223527
Gene position: 944645-945319 (Clockwise)
Preceding gene: 226223526
Following gene: 226223529
Centisome position: 32.43
GC content: 40.74
Gene sequence:
>675_bases ATGGGAAAAAAATTATCACTTTATTTTGTAAGACATGGTCAAACCTACTTAAATAAAAACTTGCGCATGCAAGGATGGGC TGATACGCCACTAACACCAGAAGGAATTGAAATAGTCAAAGAAAGTGGTCGCGGACTTGCGGAAACAGAATTCGTTGCAG CGTATTCAAGCGACTTACACCGTACGATTGCAACAGCAGGGCATTTATTAAAAGAAAATAAACACGCATTTGGTTTAACA CTAGAACCATTAAGTGAATTTCGGGAAACTTTCTTCGGCTCCTACGAAGGTGAAAAAGGCGATGTTGCCTGGAACGAAAT TGCGCATCATATGGGTTATGCGAATCAAGAAGACCTATTTAAAAATGCCGATGTACGAGAAACAATGAATGGTACAAAAG CAGCTGACCCAACAGGAGATGCGGAAGATTTCATGACATTCTGGACACGTGTAGAACAAGGTTTCTTGCATGTTATCAAT CGTCATCGCGAAACTGGTGGTAACGTTCTTATCGTCGCTCACGGAAATACTATTCGTAACATCGTCCACGAACTCGAACC ATCCATGGACGAAGCGGTTATTTTAGATAACGCGAGTGTCACCGTACTAGCTTACGAAAACGGCTTATTCAAATTAGAAC GTTTAAATGACACTTCCCATTTTAAAAAAGCATAG
Upstream 100 bases:
>100_bases ACAAAAGCCGATTTCGACAATACGGTTGCGATTCACCCAACAGGATCCGAAGAATTTGTTACAATGAAATAGAAAACAAC GATGGAGGAGGAAGTACGTA
Downstream 100 bases:
>100_bases AAAAAACGAGCTTTAGGAACTAGTTTCCCAAAGCTCGTTTTTTTATTCTTTCGGTGTATCCGGATCAGGAAGATTATTAT CAATCGCCAGCTGACCTCGC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM 1; PGAM 1; Phosphoglyceromutase 1; dPGM 1 [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGRGLAETEFVAAYSSDLHRTIATAGHLLKENKHAFGLT LEPLSEFRETFFGSYEGEKGDVAWNEIAHHMGYANQEDLFKNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVIN RHRETGGNVLIVAHGNTIRNIVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDTSHFKKA
Sequences:
>Translated_224_residues MGKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGRGLAETEFVAAYSSDLHRTIATAGHLLKENKHAFGLT LEPLSEFRETFFGSYEGEKGDVAWNEIAHHMGYANQEDLFKNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVIN RHRETGGNVLIVAHGNTIRNIVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDTSHFKKA >Mature_223_residues GKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGRGLAETEFVAAYSSDLHRTIATAGHLLKENKHAFGLTL EPLSEFRETFFGSYEGEKGDVAWNEIAHHMGYANQEDLFKNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVINR HRETGGNVLIVAHGNTIRNIVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDTSHFKKA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 25197; Mature: 25065
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGRGLAETEFVAAYSSDLH CCCEEEEEEEECCHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH RTIATAGHLLKENKHAFGLTLEPLSEFRETFFGSYEGEKGDVAWNEIAHHMGYANQEDLF HHHHHHHHHHHCCCCEECEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHH KNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVINRHRETGGNVLIVAHGNTIRN CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH IVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDTSHFKKA HHHHHCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCHHHCCC >Mature Secondary Structure GKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGRGLAETEFVAAYSSDLH CCEEEEEEEECCHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH RTIATAGHLLKENKHAFGLTLEPLSEFRETFFGSYEGEKGDVAWNEIAHHMGYANQEDLF HHHHHHHHHHHCCCCEECEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHH KNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVINRHRETGGNVLIVAHGNTIRN CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH IVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDTSHFKKA HHHHHCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]