Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226223520

Identifier: 226223520

GI number: 226223520

Start: 937780

End: 938265

Strand: Direct

Name: 226223520

Synonym: Lm4b_00919

Alternate gene names: NA

Gene position: 937780-938265 (Clockwise)

Preceding gene: 226223519

Following gene: 226223521

Centisome position: 32.2

GC content: 35.39

Gene sequence:

>486_bases
ATGGAAACAATAAATCATTTTTTTGAATGGGCTAAAAATAATAATTGGCAAGTAGATTTGTCTGCTGTAGAGAAAAACTT
GCCAGAGCAGATTTTAAAGAGGTATGGAAAGTTGCCAGATGCTTATAAGGCTTTTTATAGACAACTTAACCTCTGTAGCA
ATGCGGGTGACACTTGTTGGTTTTTATCGGAAGAAGATTTTTTAGAGAATGAGGTTGACGCCTTTTCGTGGAATTCTTTT
GAACAAATGAGTTTAGAAGCAGCAGAAGGCGATACAAACTTAGAAAATGAAGTAAAACTATTTTGGAATGCGCATTTACC
AATTATGATGAGTGTTGGCGGTTGTTATGAATATTATGCTATCACTTTAAATGACGGAAATATTGTTCATGGTTCGGAAC
CAGAGTTTGAAGAAAGTTCGATTGTAGCAGAGTCGTTCGCGGATTTTTTACTGAAAATCGTGGCTGGAGAAATAGTGATA
AGTTAA

Upstream 100 bases:

>100_bases
ATTGGGGCGACGGCGGAGACGGCTCTGGAAAAAATCGTCTAGGCAAGATTTTAATGAAAGTCAGAGACGAATGAACTCTA
AATAGTGGGAGGTAGCTTAA

Downstream 100 bases:

>100_bases
AATTAATTAGGAAATTTGCTATAATAAGAAAAACGTTTCAGAAAGGAATCGACTATGGATAATAAACTAGAATTTACAAC
GATTGATGAATATATTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCWFLSEEDFLENEVDAFSWNSF
EQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVI
S

Sequences:

>Translated_161_residues
METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCWFLSEEDFLENEVDAFSWNSF
EQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVI
S
>Mature_161_residues
METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCWFLSEEDFLENEVDAFSWNSF
EQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVI
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18442; Mature: 18442

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCW
CCHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
FLSEEDFLENEVDAFSWNSFEQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYA
EECCHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEE
ITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVIS
EEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCW
CCHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
FLSEEDFLENEVDAFSWNSFEQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYA
EECCHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEE
ITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVIS
EEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA