Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223520
Identifier: 226223520
GI number: 226223520
Start: 937780
End: 938265
Strand: Direct
Name: 226223520
Synonym: Lm4b_00919
Alternate gene names: NA
Gene position: 937780-938265 (Clockwise)
Preceding gene: 226223519
Following gene: 226223521
Centisome position: 32.2
GC content: 35.39
Gene sequence:
>486_bases ATGGAAACAATAAATCATTTTTTTGAATGGGCTAAAAATAATAATTGGCAAGTAGATTTGTCTGCTGTAGAGAAAAACTT GCCAGAGCAGATTTTAAAGAGGTATGGAAAGTTGCCAGATGCTTATAAGGCTTTTTATAGACAACTTAACCTCTGTAGCA ATGCGGGTGACACTTGTTGGTTTTTATCGGAAGAAGATTTTTTAGAGAATGAGGTTGACGCCTTTTCGTGGAATTCTTTT GAACAAATGAGTTTAGAAGCAGCAGAAGGCGATACAAACTTAGAAAATGAAGTAAAACTATTTTGGAATGCGCATTTACC AATTATGATGAGTGTTGGCGGTTGTTATGAATATTATGCTATCACTTTAAATGACGGAAATATTGTTCATGGTTCGGAAC CAGAGTTTGAAGAAAGTTCGATTGTAGCAGAGTCGTTCGCGGATTTTTTACTGAAAATCGTGGCTGGAGAAATAGTGATA AGTTAA
Upstream 100 bases:
>100_bases ATTGGGGCGACGGCGGAGACGGCTCTGGAAAAAATCGTCTAGGCAAGATTTTAATGAAAGTCAGAGACGAATGAACTCTA AATAGTGGGAGGTAGCTTAA
Downstream 100 bases:
>100_bases AATTAATTAGGAAATTTGCTATAATAAGAAAAACGTTTCAGAAAGGAATCGACTATGGATAATAAACTAGAATTTACAAC GATTGATGAATATATTACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCWFLSEEDFLENEVDAFSWNSF EQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVI S
Sequences:
>Translated_161_residues METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCWFLSEEDFLENEVDAFSWNSF EQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVI S >Mature_161_residues METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCWFLSEEDFLENEVDAFSWNSF EQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVI S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18442; Mature: 18442
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCW CCHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE FLSEEDFLENEVDAFSWNSFEQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYA EECCHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEE ITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVIS EEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure METINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKAFYRQLNLCSNAGDTCW CCHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE FLSEEDFLENEVDAFSWNSFEQMSLEAAEGDTNLENEVKLFWNAHLPIMMSVGGCYEYYA EECCHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEE ITLNDGNIVHGSEPEFEESSIVAESFADFLLKIVAGEIVIS EEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA