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The map label for this gene is yvdB [H]

Identifier: 226223516

GI number: 226223516

Start: 932610

End: 934241

Strand: Direct

Name: yvdB [H]

Synonym: Lm4b_00915

Alternate gene names: 226223516

Gene position: 932610-934241 (Clockwise)

Preceding gene: 226223515

Following gene: 226223517

Centisome position: 32.02

GC content: 40.93

Gene sequence:

>1632_bases
TTGAAGAAAGTTTGGTTGAATAGTGTAAAAGATTATACGTGGGCGAGATTTAGGAAAGACTTGCTTGCGGGAATTATCGT
GGGAATTATAGCTTTACCACTAGCGATGTCCTTCGCGATTGCATCAGGTGTAAGTCCAGAATATGGGATTTATTCGAGTT
TTGTAGCGGGAATAATCGTTTCTATTTTCGGGGGCTCGAAGTTTCAAATTGCTGGTCCAACTGGTGCTTTTATTCCAGTT
TTACTAGGAATCGTATTAACTTATGGGTACCAAGATTTACTCGTTGCTGGAATGATGGCAGGGGTCTTACTTTGCTTAAT
GGGGATTTTTAAAATTGGGACTTTAATTAAATTTATCCCGCGTCCTGTAACTATCGGATTTACAGCCGGGATTGCTGTCA
CGATTTTTATGGGGCAAGTGGGGAACTTCCTCGGTTTAACAGGTATGGAAAAACATGAATCATTTGTCGCGAATATGAAT
GAGATCTGGTTACATTTAGATTCATGGAATTTCTATAGTGTGTTCATTTCCTGTATTTGTATGCTTGTCTTATTTATTTT
TCCTAAAATTTTACCGAGAATTCCAGCACCACTTATTGGACTTGTGATTACGACGGCGATTGCGATGCTATTTTTCCCGG
ATGCGCTTCCGACGATTGGGTCAGCGTATGGAGATATTCCGAGTACTTTTCCTCCGTTTGAATTTCCCGATATGACTTTT
GCGAATATGAGTAAATTGATTGGGCCAGCTTTTGTTATTGCGATGCTCGGCGGGATTGAATCACTTCTTTCAGCGGTTGT
GGCAGATGGAATGACGAATACAAAACACAATAGTAATCGCGAGCTCATTGGGCAAGGTATCGCAAATATTGTAACGCCAA
TGTTCGGCGGAATTCCCGCAACGGGAGCTATCGCAAGAACGGCAACCAACATTAATAATGGCGCAACTAGCCGTGTCTCT
GGCGTTATCCACGGGATTTTCGTTTTACTCACTTTACTTGTACTTGCACCAGTAGCTGTCAATATTCCAATTGCTGCAAT
GGCACCGATTTTAATGCTAGTTGCTTGGAATATGAGTGAACGAAAAACCTTCCAGCACATTATTAAGTTGAAATCGGGCG
ATACTTTAGTGCTAATTATTACCTTTTTATTAACAGTATTTGCAAGCTTAACTGTGGCCGTCGAAGTTGGTTTGCTGCTG
GCAGTGGTGCTTTTCGCTAAACAAATGGGAAGTTCGATGCAAATTGAAGAAATCGAACCAGAAGGCGCCGAAATTGCTCC
TCATTTACACGAGAAAATTAGTATTTTTACTATTCGTGGGCCGCTTTTCTTTGGTGCAGCACAGATTTTCCAACAAAATA
TTATCAAAGCAATCCATGTTAAACCAAAATATCTTATCTTGCGAATGGGGAAAGTGCCGATTATTGATGCTACGGCAGAA
GGCTATTTCCACCAAATTGAAAAAGAATTTTCGAAGCAAGGCGGGCAAATTTTGATTACTGGACTAACAGATAAAGCGAA
AGAAAGTTTGAAGGGTAGCGGGCTTTACGACCGAATCGGCGAAGAACACTTCTTTTCCCATACCGAAGATGCGATTCATT
ATGCGGAAAATGCTTTAAATAAGGGAGACTGA

Upstream 100 bases:

>100_bases
ATACTTCATCATGTGATAAATATCACTTAATAAGCGTGAAGCAATCTTGCTTTGCGTTTTTTCGCGCGGATTAAAATATA
AATAAGAGAGAAGGAGCAAA

Downstream 100 bases:

>100_bases
TAGCTTTTGTCAGTTGAAACGTAATTATGTTACACTTAGTAGATAATGAAATAATTGGAGGCTATCAAGTATGGAACAAA
TGCAAGATAAAATAATAAAA

Product: transport protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKKVWLNSVKDYTWARFRKDLLAGIIVGIIALPLAMSFAIASGVSPEYGIYSSFVAGIIVSIFGGSKFQIAGPTGAFIPV
LLGIVLTYGYQDLLVAGMMAGVLLCLMGIFKIGTLIKFIPRPVTIGFTAGIAVTIFMGQVGNFLGLTGMEKHESFVANMN
EIWLHLDSWNFYSVFISCICMLVLFIFPKILPRIPAPLIGLVITTAIAMLFFPDALPTIGSAYGDIPSTFPPFEFPDMTF
ANMSKLIGPAFVIAMLGGIESLLSAVVADGMTNTKHNSNRELIGQGIANIVTPMFGGIPATGAIARTATNINNGATSRVS
GVIHGIFVLLTLLVLAPVAVNIPIAAMAPILMLVAWNMSERKTFQHIIKLKSGDTLVLIITFLLTVFASLTVAVEVGLLL
AVVLFAKQMGSSMQIEEIEPEGAEIAPHLHEKISIFTIRGPLFFGAAQIFQQNIIKAIHVKPKYLILRMGKVPIIDATAE
GYFHQIEKEFSKQGGQILITGLTDKAKESLKGSGLYDRIGEEHFFSHTEDAIHYAENALNKGD

Sequences:

>Translated_543_residues
MKKVWLNSVKDYTWARFRKDLLAGIIVGIIALPLAMSFAIASGVSPEYGIYSSFVAGIIVSIFGGSKFQIAGPTGAFIPV
LLGIVLTYGYQDLLVAGMMAGVLLCLMGIFKIGTLIKFIPRPVTIGFTAGIAVTIFMGQVGNFLGLTGMEKHESFVANMN
EIWLHLDSWNFYSVFISCICMLVLFIFPKILPRIPAPLIGLVITTAIAMLFFPDALPTIGSAYGDIPSTFPPFEFPDMTF
ANMSKLIGPAFVIAMLGGIESLLSAVVADGMTNTKHNSNRELIGQGIANIVTPMFGGIPATGAIARTATNINNGATSRVS
GVIHGIFVLLTLLVLAPVAVNIPIAAMAPILMLVAWNMSERKTFQHIIKLKSGDTLVLIITFLLTVFASLTVAVEVGLLL
AVVLFAKQMGSSMQIEEIEPEGAEIAPHLHEKISIFTIRGPLFFGAAQIFQQNIIKAIHVKPKYLILRMGKVPIIDATAE
GYFHQIEKEFSKQGGQILITGLTDKAKESLKGSGLYDRIGEEHFFSHTEDAIHYAENALNKGD
>Mature_543_residues
MKKVWLNSVKDYTWARFRKDLLAGIIVGIIALPLAMSFAIASGVSPEYGIYSSFVAGIIVSIFGGSKFQIAGPTGAFIPV
LLGIVLTYGYQDLLVAGMMAGVLLCLMGIFKIGTLIKFIPRPVTIGFTAGIAVTIFMGQVGNFLGLTGMEKHESFVANMN
EIWLHLDSWNFYSVFISCICMLVLFIFPKILPRIPAPLIGLVITTAIAMLFFPDALPTIGSAYGDIPSTFPPFEFPDMTF
ANMSKLIGPAFVIAMLGGIESLLSAVVADGMTNTKHNSNRELIGQGIANIVTPMFGGIPATGAIARTATNINNGATSRVS
GVIHGIFVLLTLLVLAPVAVNIPIAAMAPILMLVAWNMSERKTFQHIIKLKSGDTLVLIITFLLTVFASLTVAVEVGLLL
AVVLFAKQMGSSMQIEEIEPEGAEIAPHLHEKISIFTIRGPLFFGAAQIFQQNIIKAIHVKPKYLILRMGKVPIIDATAE
GYFHQIEKEFSKQGGQILITGLTDKAKESLKGSGLYDRIGEEHFFSHTEDAIHYAENALNKGD

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI4557535, Length=531, Percent_Identity=24.4821092278719, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI94721259, Length=487, Percent_Identity=23.6139630390144, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI94721257, Length=487, Percent_Identity=23.6139630390144, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI94721255, Length=487, Percent_Identity=23.6139630390144, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI94721253, Length=487, Percent_Identity=23.6139630390144, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI262206105, Length=324, Percent_Identity=25, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI262206075, Length=324, Percent_Identity=25, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI262206069, Length=324, Percent_Identity=25, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI262206063, Length=324, Percent_Identity=25, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI16306483, Length=492, Percent_Identity=23.9837398373984, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI20336282, Length=492, Percent_Identity=23.9837398373984, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI100913030, Length=628, Percent_Identity=22.9299363057325, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI47131207, Length=515, Percent_Identity=23.3009708737864, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI20336272, Length=515, Percent_Identity=23.3009708737864, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4505697, Length=371, Percent_Identity=23.4501347708895, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI45827800, Length=498, Percent_Identity=20.6827309236948, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI39752683, Length=498, Percent_Identity=20.6827309236948, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI45827802, Length=428, Percent_Identity=21.2616822429907, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI16418413, Length=518, Percent_Identity=23.3590733590734, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI269784651, Length=493, Percent_Identity=19.6754563894523, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI217272867, Length=518, Percent_Identity=23.3590733590734, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081859, Length=544, Percent_Identity=36.7647058823529, Blast_Score=296, Evalue=2e-81,
Organism=Caenorhabditis elegans, GI17566848, Length=581, Percent_Identity=23.9242685025818, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17551690, Length=599, Percent_Identity=23.3722871452421, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI86565215, Length=565, Percent_Identity=23.0088495575221, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI86564196, Length=497, Percent_Identity=24.3460764587525, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193203292, Length=526, Percent_Identity=22.6235741444867, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562578, Length=551, Percent_Identity=20.8711433756806, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI86565209, Length=239, Percent_Identity=28.8702928870293, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI86565211, Length=238, Percent_Identity=28.9915966386555, Blast_Score=72, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6319771, Length=441, Percent_Identity=25.8503401360544, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6325260, Length=586, Percent_Identity=23.2081911262799, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6323121, Length=156, Percent_Identity=27.5641025641026, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI85815873, Length=474, Percent_Identity=26.3713080168776, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI19922482, Length=474, Percent_Identity=23.6286919831224, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24647160, Length=437, Percent_Identity=26.3157894736842, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI21355087, Length=437, Percent_Identity=26.3157894736842, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24649801, Length=422, Percent_Identity=24.8815165876777, Blast_Score=112, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21358229, Length=444, Percent_Identity=25.6756756756757, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24663084, Length=546, Percent_Identity=26.5567765567766, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21357695, Length=546, Percent_Identity=26.5567765567766, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24651449, Length=452, Percent_Identity=24.3362831858407, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 58628; Mature: 58628

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]