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The map label for this gene is rsbV

Identifier: 226223512

GI number: 226223512

Start: 930247

End: 930591

Strand: Direct

Name: rsbV

Synonym: Lm4b_00911

Alternate gene names: 226223512

Gene position: 930247-930591 (Clockwise)

Preceding gene: 226223511

Following gene: 226223513

Centisome position: 31.94

GC content: 36.52

Gene sequence:

>345_bases
ATGAATATTAGTATAGAAATAAAAGAACGTGATACTGACCACATAGACATATTTGTTGCTGGGGAGATCGATGCTTATAC
AGCGCCAAAGGTAAAAGAAGCACTTGAAGTATATCAAGTAAAAGAGGGTATAGTACTTCGAATCGATTTAACAGAAGTAA
GTTATATGGATAGTACCGGATTAGGCGTATTTGTAGGAGCGTTTAAAAGCTTACGTCAACGCCAAAGTGAACTTGTCTTG
TTTGGTTTAAGCGACCGACTTTTCCGATTGTTTGAAATCACAGGATTGTCAGATATCATTGAAATCAAAAATGTAGAGGG
TGAAATGAATGGCAACAATGCATGA

Upstream 100 bases:

>100_bases
AAACGTATTTAAAGAGTGGAGCGTTTTTATTTTTGAATGTTTTAATTTTATTAGTTAGGGTAAAATCGACAGTATACTTA
AAATTAGATGGGGTGAAGTG

Downstream 100 bases:

>100_bases
CAAAATTACATTACAACTTCCTGCCAAGCCTGAATATGTTAGTTTAGGTAGACTTTCATTATCAGGAATTGCAAGTCGCG
CAGGATTTTCTTATGAAGCA

Product: anti-anti-sigma factor (antagonist of RsbW)

Products: NA

Alternate protein names: Anti-anti-sigma-B factor

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGIVLRIDLTEVSYMDSTGLGVFVGAFKSLRQRQSELVL
FGLSDRLFRLFEITGLSDIIEIKNVEGEMNGNNA

Sequences:

>Translated_114_residues
MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGIVLRIDLTEVSYMDSTGLGVFVGAFKSLRQRQSELVL
FGLSDRLFRLFEITGLSDIIEIKNVEGEMNGNNA
>Mature_114_residues
MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGIVLRIDLTEVSYMDSTGLGVFVGAFKSLRQRQSELVL
FGLSDRLFRLFEITGLSDIIEIKNVEGEMNGNNA

Specific function: Positive regulator of sigma-B activity. Non- phosphorylated rsbV binds to rsbW, preventing its association with sigma-B. When phosphorylated, releases rsbW, which is then free to complex with and inactivate sigma-B

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSBV_LISIN (P0A4J9)

Other databases:

- EMBL:   AL596166
- PIR:   AD1544
- RefSeq:   NP_470233.1
- ProteinModelPortal:   P0A4J9
- GeneID:   1129397
- GenomeReviews:   AL592022_GR
- KEGG:   lin:lin0892
- GenoList:   LIN0892
- HOGENOM:   HBG708840
- OMA:   LEAVEYM
- ProtClustDB:   CLSK564149
- BioCyc:   LINN272626:LIN0892-MONOMER
- InterPro:   IPR003658
- InterPro:   IPR002645
- Gene3D:   G3DSA:3.30.750.24
- TIGRFAMs:   TIGR00377

Pfam domain/function: PF01740 STAS; SSF52091 STAS

EC number: NA

Molecular weight: Translated: 12799; Mature: 12799

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGIVLRIDLTEVSYMDSTG
CCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECEEEECCCCC
LGVFVGAFKSLRQRQSELVLFGLSDRLFRLFEITGLSDIIEIKNVEGEMNGNNA
CHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCC
>Mature Secondary Structure
MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGIVLRIDLTEVSYMDSTG
CCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECEEEECCCCC
LGVFVGAFKSLRQRQSELVLFGLSDRLFRLFEITGLSDIIEIKNVEGEMNGNNA
CHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669