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The map label for this gene is rsbT

Identifier: 226223510

GI number: 226223510

Start: 928666

End: 929076

Strand: Direct

Name: rsbT

Synonym: Lm4b_00909

Alternate gene names: 226223510

Gene position: 928666-929076 (Clockwise)

Preceding gene: 226223509

Following gene: 226223511

Centisome position: 31.88

GC content: 38.2

Gene sequence:

>411_bases
ATGACATTCCAATCCTGTGTAAAGATAATTAATGAATGGGACATTGTAGCTGCTAGGCAACTAGGTAGAAAAATATCCAA
AGAAATTGGCTTTGGAACCGTTGACCAAGCAAGAATTACAACTGCCATCAGTGAATTAGCTAGAAATATTTTCCTTTATG
CTGGACGAGGAGAAATCTGTATCGAAAAAGTAAATGAATCTGGTAAACAAGGGATGATTATTGTTGCCAAAGACAAAGGT
CCAGGTATTGTAGACATAAGAAAAGTAATGCAAGATGGTTATACAACATCGGGCGGACTTGGAGCAGGGCTTCCAGGAGT
CAAACGTTTAATGGACAGTTTTGATATTGAATCCAGTATTGAAGGCGATTCTAAAGGAACGGTAATTACAACAACGAAAT
GGGTTCGGTAA

Upstream 100 bases:

>100_bases
TTACACTAATTGAACTCGGAATTACGTTTAGCGGAGTACTTTCGGCGATGGACCTTGAAAGTGGTCTGGAAAAACTTAAA
CAGGAATTGGGGGAATGAAC

Downstream 100 bases:

>100_bases
GGAGAGCTAGAAAAAAATGGAAAAAGCTTTTGAGGGAAAATACCGTGATATTCTTATTCAGTATTTAGAACATCAAGATG
AAGAAATTCTTTATACTTGC

Product: positive regulation of sigma-B activity

Products: NA

Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAISELARNIFLYAGRGEICIEKVNESGKQGMIIVAKDKG
PGIVDIRKVMQDGYTTSGGLGAGLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR

Sequences:

>Translated_136_residues
MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAISELARNIFLYAGRGEICIEKVNESGKQGMIIVAKDKG
PGIVDIRKVMQDGYTTSGGLGAGLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR
>Mature_135_residues
TFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAISELARNIFLYAGRGEICIEKVNESGKQGMIIVAKDKGP
GIVDIRKVMQDGYTTSGGLGAGLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR

Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 14754; Mature: 14623

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAISELARNIFLYAGRGEIC
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEE
IEKVNESGKQGMIIVAKDKGPGIVDIRKVMQDGYTTSGGLGAGLPGVKRLMDSFDIESSI
HEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
EGDSKGTVITTTKWVR
CCCCCCCEEECCCCCC
>Mature Secondary Structure 
TFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAISELARNIFLYAGRGEIC
CHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEE
IEKVNESGKQGMIIVAKDKGPGIVDIRKVMQDGYTTSGGLGAGLPGVKRLMDSFDIESSI
HEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
EGDSKGTVITTTKWVR
CCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]