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The map label for this gene is yjgJ [C]

Identifier: 226223470

GI number: 226223470

Start: 891642

End: 892196

Strand: Direct

Name: yjgJ [C]

Synonym: Lm4b_00868

Alternate gene names: 226223470

Gene position: 891642-892196 (Clockwise)

Preceding gene: 226223469

Following gene: 226223471

Centisome position: 30.61

GC content: 37.66

Gene sequence:

>555_bases
ATGACGAAAAAGCTAATCAAAGAAGTCGCATTAACTCTTTTTGCAGAAAAAGGCTATGATGGAACAGCGCTTTCGGAAAT
CGCGAAAGCTGTTGGAATTAAAACACCATCGTTATATGCCCATTTTGCATCAAAAGAAGCCCTATTTTTAGAAGTTTATC
AAGATAGTATTCAGATGGAATTAACAGAACTAGGGAAAGTAGCAGAGCGAGATGATTTGGTTGGGGAAAAGAAGCTACAA
TCTATTTTCTTTGTAGCGACAGATTTTTCTAGCAATCCTGATGAAAAGAAATTTTTCCAGCGTGCCGTCTTTTATCCACC
TAAGTCGCTTTTTCAAGAATTAAAGGAAGAAACAAAGACATATGAACAACTGACGAATCGGATATTACGCGAAACGTTAG
AAAAAATAGTATCCGAAGAAGCACTTGTAAGATGGATGCACGTTTTTTATGCACTTCTTGATGGACTGAGTGTGGAACAC
GGCATTTATGATGAAACGGAATTTGAGTTGCGAAGAAAATCTGCTTGGGCAGTTCTCGCAAGTTTACTCAAATGA

Upstream 100 bases:

>100_bases
TGGAAATATATCGAAAAATAAAAAATCAAACTTTTTCCTTTACGTTTGGTTTTTTATTTGTTAAAATTTAACTAATGAAC
GTTAGTTAGGAGGGTGCTTT

Downstream 100 bases:

>100_bases
ATTGGAGGTAAGGAAATTGGCTTGGTTTTATTTAATTATGGCAGGATTATCAGAAATTGTTTGGGCTTTTGGACTAAAAG
AATCGCATGGTTTCACGATG

Product: transcription regulator TetR/AcrR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcription Regulator TetR/AcrR Family; Transcriptional Regulator; Transcription Regulator TetR/AcrR Family Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFASKEALFLEVYQDSIQMELTELGKVAERDDLVGEKKLQ
SIFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEH
GIYDETEFELRRKSAWAVLASLLK

Sequences:

>Translated_184_residues
MTKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFASKEALFLEVYQDSIQMELTELGKVAERDDLVGEKKLQ
SIFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEH
GIYDETEFELRRKSAWAVLASLLK
>Mature_183_residues
TKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFASKEALFLEVYQDSIQMELTELGKVAERDDLVGEKKLQS
IFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEHG
IYDETEFELRRKSAWAVLASLLK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21156; Mature: 21024

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFASKEALFLEVYQDSIQME
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
LTELGKVAERDDLVGEKKLQSIFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKT
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
YEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEHGIYDETEFELRRKSAWAVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SLLK
HHHC
>Mature Secondary Structure 
TKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFASKEALFLEVYQDSIQME
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
LTELGKVAERDDLVGEKKLQSIFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKT
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
YEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEHGIYDETEFELRRKSAWAVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SLLK
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA