Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223431
Identifier: 226223431
GI number: 226223431
Start: 840857
End: 841783
Strand: Direct
Name: 226223431
Synonym: Lm4b_00829
Alternate gene names: NA
Gene position: 840857-841783 (Clockwise)
Preceding gene: 226223430
Following gene: 226223432
Centisome position: 28.87
GC content: 44.23
Gene sequence:
>927_bases ATGTCCATTACGAACTTATTAAATATTAAATATCCAATTATCCAAGGTGCGATGGCTCAAATTGCCAAAGCTCCACTTGT AGCCGCTGTATCTAATGCAGGCGGTTTAGGAATTATCGCTTCTGGCGGAATGACTGCCGACATGCTACGCGAAGAAATCA AAAAAACAAAAGCACTGACAGATAAACCATTTGGCGTCAACTTAATGCTAATGATGACCAATATTGCCGAATTAACCGAA GTAATTATTGAAGAAAAAGTGGGAATCGTTACAACTGGAGCGGGAACGCCAAAAACGTTCATGCCAATTTGGAAAGAAGC TGGAATTATTGTGATTCCCGTTGTCCCATCCGTGATGATTGCTAAACGTATGGAAAAAATGGGCGCAGATGCAGTTATCG CAGAAGGAACAGAAGCAGGCGGACACGTCGGCGAAACAACAACAATGGCACTTTTACCTCAAATCGTGGATGCCGTTACT ATCCCAGTCATTGGCGCAGGTGGAATTGCAGATGGTCGCGGAATCGTCGCAGCGCTTGCTCTAGGTGCAAAAGGTGTCCA AATCGGAACACGCTTCCTAGCAACCGACGAATGCCCAGTACACCCGGACTTTAAAGCAGCCGTGATTAAAGCTTCCGACC GCGACACAATGGTTACCGGAAGAAAAGCCGGTGCCCCTGTTCGCTCGATTAAAAACAAAATGATTAAAGAATACATCCGT TTAGAAGAAGAAAACGCCGATCGCGACACGTTAGAAGAGCTAACTTTAGGTTCTTTACGAAAAGCAGTACAAGAAGGCGA CACAGACAACGGCTCTGTCATGGCCGGTCAAATCGCTGGCTTAATTACAGAAATCAAACCTTGTAAAGATGTTATTGAAG AGATGATGACAGATGCTAAGAATGTGATTGCAGGGTTAGAATTATAA
Upstream 100 bases:
>100_bases TGAAGAGTCCAATTAATGGCGAAAAACAGCTCTAGTTTATAGGGCTGTTTTTTGATATACTAAATTGTGATAAAACAAAC AAGAACGCAGGAGGAAAAAG
Downstream 100 bases:
>100_bases AATAAAAACAGTTATTTTCTGCTTAATAAAGTAGAGAATAACTGTTTTTTTGTAGTTGCGATGTTGTTTACAAAGGTAAA GTCAAAAAATGCACTAATTT
Product: oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIKKTKALTDKPFGVNLMLMMTNIAELTE VIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVT IPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIR LEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKNVIAGLEL
Sequences:
>Translated_308_residues MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIKKTKALTDKPFGVNLMLMMTNIAELTE VIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVT IPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIR LEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKNVIAGLEL >Mature_307_residues SITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIKKTKALTDKPFGVNLMLMMTNIAELTEV IIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVTI PVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRL EEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKNVIAGLEL
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 32318; Mature: 32187
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIKKTKALT CCCCHHCCCCHHHHHHHHHHHHHCCHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCC DKPFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMI CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCEEEEECHHHHHH AKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALA HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHH LGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIR HCCCCHHHCCEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHH LEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAK HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH NVIAGLEL HHHHCCCC >Mature Secondary Structure SITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIKKTKALT CCCHHCCCCHHHHHHHHHHHHHCCHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCC DKPFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMI CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCEEEEECHHHHHH AKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALA HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHH LGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIR HCCCCHHHCCEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHH LEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAK HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH NVIAGLEL HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA