Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223422
Identifier: 226223422
GI number: 226223422
Start: 833321
End: 833779
Strand: Reverse
Name: 226223422
Synonym: Lm4b_00820
Alternate gene names: NA
Gene position: 833779-833321 (Counterclockwise)
Preceding gene: 226223437
Following gene: 226223421
Centisome position: 28.63
GC content: 32.46
Gene sequence:
>459_bases ATGAAAAAATATCGCTTTTCAGAACTCAATATCAATATAGGTACCGTGCTTCTTATAATTATGATTAGCTTTACCTTTAT TACTTTTATAATAATTGGAATGACACTTCCGGTACCATGGGAATATTTTGTTATTCTTTTTGTCATAGCCCTCATGTTCT CAGTATTTTTCAAGAGGCTTTTTCCAAGTAACTTTTCTGTTAGTGAAGAAGCTTTTTACTATAAAGAAAAAGCATATCCT TATAGCGAATATCTTATCGAATGCGATGCTAAATTAATTCGCTTTAATGGAGGCTCCAGAGGGATGCCTTACTATCGAAT TGTTATCATAAATAAAGATACACGCGCAGAAAAACTAATTCGAGTATACAATGCAGAGCGTAGATACAAGAACGCAAATA AGCATATGCAAGAACTAATGGAAGAACTGCGTAATGAAATCAATCAATATCAAGCTTAA
Upstream 100 bases:
>100_bases TCCACATGAACAATAGTTTTTTTGAATTTCTCTAAGATAGACAACGTTTATTTTTAGTGCTAAAATTTCTTTAATAAAAC AGCTTAGGTGGCAGATATTC
Downstream 100 bases:
>100_bases CTAAAACATCTTAGGTGGTGCACAAAAATGAAAAGCTACCCTTTCTTTAAATATAATATGAATATCAAAACATTTTTTAT GTTTATTGTTTGTTTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKKYRFSELNINIGTVLLIIMISFTFITFIIIGMTLPVPWEYFVILFVIALMFSVFFKRLFPSNFSVSEEAFYYKEKAYP YSEYLIECDAKLIRFNGGSRGMPYYRIVIINKDTRAEKLIRVYNAERRYKNANKHMQELMEELRNEINQYQA
Sequences:
>Translated_152_residues MKKYRFSELNINIGTVLLIIMISFTFITFIIIGMTLPVPWEYFVILFVIALMFSVFFKRLFPSNFSVSEEAFYYKEKAYP YSEYLIECDAKLIRFNGGSRGMPYYRIVIINKDTRAEKLIRVYNAERRYKNANKHMQELMEELRNEINQYQA >Mature_152_residues MKKYRFSELNINIGTVLLIIMISFTFITFIIIGMTLPVPWEYFVILFVIALMFSVFFKRLFPSNFSVSEEAFYYKEKAYP YSEYLIECDAKLIRFNGGSRGMPYYRIVIINKDTRAEKLIRVYNAERRYKNANKHMQELMEELRNEINQYQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18242; Mature: 18242
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYRFSELNINIGTVLLIIMISFTFITFIIIGMTLPVPWEYFVILFVIALMFSVFFKRL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH FPSNFSVSEEAFYYKEKAYPYSEYLIECDAKLIRFNGGSRGMPYYRIVIINKDTRAEKLI CCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCHHHHHHH RVYNAERRYKNANKHMQELMEELRNEINQYQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKYRFSELNINIGTVLLIIMISFTFITFIIIGMTLPVPWEYFVILFVIALMFSVFFKRL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH FPSNFSVSEEAFYYKEKAYPYSEYLIECDAKLIRFNGGSRGMPYYRIVIINKDTRAEKLI CCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCHHHHHHH RVYNAERRYKNANKHMQELMEELRNEINQYQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA