Click here to switch to the map view.

The map label for this gene is 226223421

Identifier: 226223421

GI number: 226223421

Start: 832820

End: 833293

Strand: Reverse

Name: 226223421

Synonym: Lm4b_00819

Alternate gene names: NA

Gene position: 833293-832820 (Counterclockwise)

Preceding gene: 226223422

Following gene: 226223417

Centisome position: 28.61

GC content: 31.43

Gene sequence:

>474_bases
ATGAAAAGCTACCCTTTCTTTAAATATAATATGAATATCAAAACATTTTTTATGTTTATTGTTTGTTTTGCAATACTTAG
CCTTGGACTGTATTTTTTTATTACCTTTGAGTCACTCCGTATTTGGCAATTTTTTGGTATATATACCTTTTTTAGCGCGT
ATACTATTTACGTACTGACTACTTATGTTAATGGTACTGTTTCCGTTAATAGTCATGCGCTCTTTTATAAAAAAGGGTTT
TCGGATAAAAAGTATCTTTTCAATCAATATATGCTGGAGTGTGACACCAGATTGCACGGGCGGACCACTTCTTTTCTTCC
CTTTTACACAATCAATATTCTTGATTTAGAGACAGGTAAAGAAACAAAAATTAAGATTCGTAATGCAGCTATCGTTCACA
GAAATGGCAGAAAGAACTTCCATTTAGAAATAGTAAATCTCGCCGAACAATTAAAAAAAATACAAGCTAAATAG

Upstream 100 bases:

>100_bases
CAAGAACGCAAATAAGCATATGCAAGAACTAATGGAAGAACTGCGTAATGAAATCAATCAATATCAAGCTTAACTAAAAC
ATCTTAGGTGGTGCACAAAA

Downstream 100 bases:

>100_bases
AAAGCCCTAAGAACAAGACACTGTTCTTAGGGCTTTTTGTCATTCTAAAAAATCATCATATAAATATGTTTCAATCATAT
TTAAATTTTGGCGTAAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQFFGIYTFFSAYTIYVLTTYVNGTVSVNSHALFYKKGF
SDKKYLFNQYMLECDTRLHGRTTSFLPFYTINILDLETGKETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK

Sequences:

>Translated_157_residues
MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQFFGIYTFFSAYTIYVLTTYVNGTVSVNSHALFYKKGF
SDKKYLFNQYMLECDTRLHGRTTSFLPFYTINILDLETGKETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK
>Mature_157_residues
MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQFFGIYTFFSAYTIYVLTTYVNGTVSVNSHALFYKKGF
SDKKYLFNQYMLECDTRLHGRTTSFLPFYTINILDLETGKETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18658; Mature: 18658

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQFFGIYTFFSAYTIYVLT
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TYVNGTVSVNSHALFYKKGFSDKKYLFNQYMLECDTRLHGRTTSFLPFYTINILDLETGK
EEECCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCC
ETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK
CEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQFFGIYTFFSAYTIYVLT
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TYVNGTVSVNSHALFYKKGFSDKKYLFNQYMLECDTRLHGRTTSFLPFYTINILDLETGK
EEECCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCC
ETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK
CEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA