Click here to switch to the map view.

The map label for this gene is yqkB [H]

Identifier: 226223418

GI number: 226223418

Start: 829457

End: 829810

Strand: Direct

Name: yqkB [H]

Synonym: Lm4b_00816

Alternate gene names: 226223418

Gene position: 829457-829810 (Clockwise)

Preceding gene: 226223415

Following gene: 226223419

Centisome position: 28.48

GC content: 37.01

Gene sequence:

>354_bases
ATGTATATAACATTTACAGATAGCGCTAAAAATCGGCTTGCTGCACTACGGTCGAATTTAGAAGGGCGGCTACATTTGTA
TTATGATACAGAAGGCTGTTCTTGCGAAAATAGCGGTATTTTCACATTGCGATTAGTAGAAGAGAAAACAGCGGAAGATG
ACGAAATTGAATCAAACATTGGTCCAGTGCTAATTAAACGATGGACAGAAATGTTTTTAGAAGAAGCGCTAACTATCGAT
TACAACGACACAGAAAAAACCATGATTCTAAAAAGCGATGGTCAGTATTATAATCGTAATCTACTGCTTGTCACAAATAC
AGACGAAGTAATTAGTTGCCCGGTAACTTCATAA

Upstream 100 bases:

>100_bases
ATGAAAACCCAATGTATAATTTGTGAAATTAATCGTATGTGAGCAGTGCGGAGGTAAAGTTGGAAATGTGGGTGTATAAT
AGAGCTAGAGGTGATAAGTT

Downstream 100 bases:

>100_bases
TAATAGAAGAAAAGCCTAGAATAAATTTTTTATTCTAGGCTTTTTTATGAAAATTTCATGAGAAAGTGGTGAAACTTTAG
ACATATAGTTACACTGACCT

Product: YqkB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLRLVEEKTAEDDEIESNIGPVLIKRWTEMFLEEALTID
YNDTEKTMILKSDGQYYNRNLLLVTNTDEVISCPVTS

Sequences:

>Translated_117_residues
MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLRLVEEKTAEDDEIESNIGPVLIKRWTEMFLEEALTID
YNDTEKTMILKSDGQYYNRNLLLVTNTDEVISCPVTS
>Mature_117_residues
MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLRLVEEKTAEDDEIESNIGPVLIKRWTEMFLEEALTID
YNDTEKTMILKSDGQYYNRNLLLVTNTDEVISCPVTS

Specific function: Unknown

COG id: COG4918

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13413; Mature: 13413

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLRLVEEKTAEDDEIESNI
CEEEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHCCC
GPVLIKRWTEMFLEEALTIDYNDTEKTMILKSDGQYYNRNLLLVTNTDEVISCPVTS
CHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCEECCEEEEEECCCCEEECCCCC
>Mature Secondary Structure
MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLRLVEEKTAEDDEIESNI
CEEEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHCCC
GPVLIKRWTEMFLEEALTIDYNDTEKTMILKSDGQYYNRNLLLVTNTDEVISCPVTS
CHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCEECCEEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]