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The map label for this gene is yojE [H]

Identifier: 226223413

GI number: 226223413

Start: 824399

End: 825319

Strand: Reverse

Name: yojE [H]

Synonym: Lm4b_00811

Alternate gene names: 226223413

Gene position: 825319-824399 (Counterclockwise)

Preceding gene: 226223414

Following gene: 226223412

Centisome position: 28.34

GC content: 39.2

Gene sequence:

>921_bases
ATGGAAAATAAACAAAATGGACAGCTAGGCGGAATCATCGCTGGCGCTCTCGCTTATGTATGTTGGGGTGTCCTTCCGAT
TTACTGGAAGCTAGTCACAAATGTCCCACCAATGGAGATTTTGGCCTATAGAATTATATGGTCTTTTATTTTTATGTTAT
TTTTGATCGTTTGTTTGCGAAAAGCTTCGATGGTTTTTCAAGAAACTAAGGACGTATTGCTTAAACCAAAAACGCTGATT
GCGATTATTGCGGCAGCTTTTTTAGTGACAGCAAACTGGTATTTATTCATTTATACGGTGAATAGTGGGCATGTGACCGA
AGCAAGTCTTGGTTATTACATCAATCCACTTGTAAACGTACTTCTCGCAACAGTTATCTTAAAAGAACGCTTGAGTCGTG
GCGAAATTATTGCTGTTATTTCTGCTACTATCGGTGTTTTAATCCTCACATGGCATCTTGGATCTGTTCCTTGGGCGGCA
ATCGGTATGGCGGTTACTTTCTCGCTTTACGGGCTAATTAAAAAAGTCGTTTCCGTATCTGTTTGGACTGGTTTAACCCT
TGAGACAATGATTATTACGCCATTCGCGCTTATTTATGTAATCTTTTTCGCGACCAATGGATTAATGCAGTACGCGGCAC
AAACCAATATTATTTTAGTTGGTGCTGGTGTCGTTACAGCTATCCCGCTCCTTCTGTTTGCCACTGCTGCGAAAAAAATC
AGCTATACAATGGTTGGCTTCCTGCAATATATCGGACCAACATTAATGCTCGCACTCGGCGTATTACTATTTAAAGAAAG
TTTCGATCATATTCAATTGTTTGCATTCATGTTTATTTGGTTAGCACTGATTATTTTCACGATTTCTCACATTTATTCCG
CAGCCAAAATTAAACAATTAGCAAACGCCGCAAAAAAATAA

Upstream 100 bases:

>100_bases
ACTACGAATAGCTAGCCTATTCGTAGTTTTTTTTGTAGCTTTATTCCCCCTTTTAAGCTAAAATAGTTCTATTGTTTAAA
AAAAGGGGGCTAACATCGCT

Downstream 100 bases:

>100_bases
ATGTTTCCCAGTCCCCTCTTTCGGGAATAATTCTTCTATCAAACGAGAATCTATTCCATAAAAATGAATAGGGGGCTTTT
TTCATGAAAATTGGTATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLRKASMVFQETKDVLLKPKTLI
AIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNVLLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAA
IGMAVTFSLYGLIKKVVSVSVWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIILVGAGVVTAIPLLLFATAAKKI
SYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKIKQLANAAKK

Sequences:

>Translated_306_residues
MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLRKASMVFQETKDVLLKPKTLI
AIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNVLLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAA
IGMAVTFSLYGLIKKVVSVSVWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIILVGAGVVTAIPLLLFATAAKKI
SYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKIKQLANAAKK
>Mature_306_residues
MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLRKASMVFQETKDVLLKPKTLI
AIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNVLLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAA
IGMAVTFSLYGLIKKVVSVSVWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIILVGAGVVTAIPLLLFATAAKKI
SYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKIKQLANAAKK

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI48994976, Length=302, Percent_Identity=41.0596026490066, Blast_Score=230, Evalue=8e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR004626 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33783; Mature: 33783

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIILVGAGVVTAIPLLLFATAAKKI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHH
SYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKIKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANAAKK
HHHHCC
>Mature Secondary Structure
MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIILVGAGVVTAIPLLLFATAAKKI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHH
SYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKIKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANAAKK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]