Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223383
Identifier: 226223383
GI number: 226223383
Start: 790490
End: 791788
Strand: Direct
Name: 226223383
Synonym: Lm4b_00781
Alternate gene names: NA
Gene position: 790490-791788 (Clockwise)
Preceding gene: 226223382
Following gene: 226223384
Centisome position: 27.14
GC content: 34.26
Gene sequence:
>1299_bases TTGGTTATTGCAAATCGAGATTTTATACAAATAAGTACGGAAAAAATAAAAAAAGAAATAAATAATCAAAAATTAGTTGA AATGTATAAAAGGTGTATGGAAAACACATTAGACACCACCATAAAAATTCGAGATAGTGGACTCACATTTATTTTAACAG GTGATATTCCAGCAATGTGGCTACGTGATTCAGTATGCCAAGTACGACCTTTTCTAATTTTTGCTAAAGAAAATGAAGAA ATTGAGTCGATGTTGATTGGCCTTAGCAAAGAACAAGTGAGTTTAGTTGAAATTGATCCTTATGCTAACGCTTTTAATGA AACACCAAATGGAGCTGGACATCAAGCTGATAAAACAGAAATGCATCCACAAGTATGGGAACGAAAATATGAGATTGATT CATTATGCTATCCGATTCAATTAGCGTACTTTATTTGGAAAATTACTGGAAGAACAGAACAATTTGACTCAGCATTTTTC AAGATGTTACAAACGATTTTTGCTTTATGGGAAGTAGAACAACATCATGAAACAAAATCGCCGTATCGTTTTGAACGGAT GGACTGTGTTCCTTCTGATACTCTAAAAAGAAACGGACTAGGAACAGAAACAGCATACACAGGAATGCTTTGGTCAGGAT TTAGACCAAGTGATGATGCTTGTGAATATGGGTACCTTATCCCTTCAAATATGTTTGCAGTAGTAGTTTTAGGTTATGCT AAAGAAATTATAGAAGCTTTTTATCCAAGAGAAATAGAAACGATAAAACAAGCAGTTACTTTACAAAATGATATTCAATT AGGGATTGAAAAGTTTGGTACATATAATCATCCGACTTTTGGTGAAATATTTGCTTTTGAAGTAGATGGTCTTGGAAATC AATTATTGATGGATGATGCAAATGTTCCAAGTTTACTCTCTATGCCAATCATCGAATATCTTGAAAAGGAATCTCCCATT TATCAGAATACGCGGAAGTTTATTTTAAGTAAGTCAAATCCGTATTATTTTGAAGGTAAACTAGCAAAAGGAATTGGTAG TCCGCATACACCAGCAGGATATATTTGGCCAATTGGACTGGCAATTCAAGGATTGACAGCAAGTGATAAATCAGAAAAAC TGGAAATTTTGCAAATGTTGTTAAGAACGGATGCCGGAACTGGATTAATGCATGAATCGTTTCATCCAGATTACCCGGAA GACTTTACGCGCGAATGGTTTTCTTGGGCTAATATGATGTTTTGTGAATTAGTACTTGATGTAGCTGGGTTTCGAATGGC AAATGTTTTGAAGAACTAA
Upstream 100 bases:
>100_bases GCGATTTCAATTTTATGTTGACAGAGATTAAATATATATAGTATTATTTAAATATGATAAATGATAATTAAATATAATTA ATTAAAAAGGAGTGAAACAT
Downstream 100 bases:
>100_bases CGAAGGAGGCTTATTGATGGCAACAATTAGAAATAAATCTGCCCAAATACACCAACAACGAATGGCTTACCTTTTTATTG CACTTCCAGTTTTATTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MVIANRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE IESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYFIWKITGRTEQFDSAFF KMLQTIFALWEVEQHHETKSPYRFERMDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA KEIIEAFYPREIETIKQAVTLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPI YQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPE DFTREWFSWANMMFCELVLDVAGFRMANVLKN
Sequences:
>Translated_432_residues MVIANRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE IESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYFIWKITGRTEQFDSAFF KMLQTIFALWEVEQHHETKSPYRFERMDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA KEIIEAFYPREIETIKQAVTLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPI YQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPE DFTREWFSWANMMFCELVLDVAGFRMANVLKN >Mature_432_residues MVIANRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE IESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYFIWKITGRTEQFDSAFF KMLQTIFALWEVEQHHETKSPYRFERMDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA KEIIEAFYPREIETIKQAVTLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPI YQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPE DFTREWFSWANMMFCELVLDVAGFRMANVLKN
Specific function: Unknown
COG id: COG3538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49606; Mature: 49606
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIANRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMW CEECCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCHHH LRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTE HHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCC MHPQVWERKYEIDSLCYPIQLAYFIWKITGRTEQFDSAFFKMLQTIFALWEVEQHHETKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYRFERMDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA CCCCHHCCCCCCHHHHHCCCCCCHHHHCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHH KEIIEAFYPREIETIKQAVTLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCC NVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGL CCCHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEEEECCHHHCCCCCCCCCCEEEEECC AIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLD EEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VAGFRMANVLKN HHHHHHHHHHCC >Mature Secondary Structure MVIANRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMW CEECCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCHHH LRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTE HHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCC MHPQVWERKYEIDSLCYPIQLAYFIWKITGRTEQFDSAFFKMLQTIFALWEVEQHHETKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYRFERMDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA CCCCHHCCCCCCHHHHHCCCCCCHHHHCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHH KEIIEAFYPREIETIKQAVTLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCC NVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGL CCCHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEEEECCHHHCCCCCCCCCCEEEEECC AIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLD EEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VAGFRMANVLKN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA