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The map label for this gene is 226223329

Identifier: 226223329

GI number: 226223329

Start: 740249

End: 740485

Strand: Direct

Name: 226223329

Synonym: Lm4b_00726

Alternate gene names: NA

Gene position: 740249-740485 (Clockwise)

Preceding gene: 226223328

Following gene: 226223330

Centisome position: 25.41

GC content: 37.97

Gene sequence:

>237_bases
ATGAAAATTAATCATACTATTCCACTCAGAATCGACTTCGAATTAGGACGTACGAAACAGCCAGTCGGTAGTTTGCTAGA
TGTAAAAAAAGGGACCGTTTTTCGGTTAGAAGATTCCACAGCTAATGTGGTTAAAATTACGATTTCAGGCAAATGCATCG
GTTACGGTGAGATTTTGACAAAAGACGGCAAGATGTTTGTCAAAATAACGAAATTAGGAGAGGGAAGTTCTTCATGA

Upstream 100 bases:

>100_bases
ACATACCAAAGTGGTTTCCAAGGGAATACAAAAGTTATTCGTGTGGCGGATGACGTGATGAAACAAATTGTGAACTTGAT
TCAGTAGGGAGTTTAGCTAA

Downstream 100 bases:

>100_bases
GAGCTAGGGAGTGACAAAAAATGAGCGATAAATTAAGTCAAGAACAAATTGACGCCCTGCTTTCCCAAATAAGTGAAGGT
AAGGTAGTTGATGAAAGTAC

Product: flagellar motor switch protein

Products: NA

Alternate protein names: Flagellar Switch Protein

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKMFVKITKLGEGSSS

Sequences:

>Translated_78_residues
MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKMFVKITKLGEGSSS
>Mature_78_residues
MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKMFVKITKLGEGSSS

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8510; Mature: 8510

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILT
CCCCCEEEEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCEEEECCCEEE
KDGKMFVKITKLGEGSSS
CCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILT
CCCCCEEEEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCEEEECCCEEE
KDGKMFVKITKLGEGSSS
CCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA