| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223266
Identifier: 226223266
GI number: 226223266
Start: 681404
End: 682132
Strand: Direct
Name: 226223266
Synonym: Lm4b_00663
Alternate gene names: NA
Gene position: 681404-682132 (Clockwise)
Preceding gene: 226223265
Following gene: 226223267
Centisome position: 23.39
GC content: 37.45
Gene sequence:
>729_bases ATGAAAAAGATCAATTGGACACAATGGATAGCATTATTTGTTTTTGCGTCAATGGGGATTTCTGTTGTTTTTACTATTTA CGAAATTTTTACAGCACCGATCAAGCAGCCAGCAACTGGGCCGCATGTGACGTTACGAGGGGACTATATATTTTTACTAT TTGAAATTATATTAGGAATTTTTATTTTGTTGCTACCTTCGATTATTGCACGACGCTTCAAATTTGAAATACCTGGTCTT GTGTATATTTTGTTTATTGTATTTCTATACGGATCCATTTATCTTGGTACAGTTCAAAAATTCTATTCAACCGTGCCACA TTGGGATAAAATTTTACATACTTTTAGTGGGGCGATGCTTGGAGCAATTGGCTTTTCGTTCGTTAGTTTGCTAAATGCTA ATAACAAAGTTGTCATGAAACTTAAACCGGGTTTTATCGCTGTATTCGCGTTTTGTTTCGCGGTGACAATGGGGGCTTTC TGGGAAGTGTATGAGTATACTTTTGATGGAATTATGAACTTAAATATGCAACGTTATAATCTATCTAATGGAACACCGCT CACTGGCCGCGCCGCACTGGAAGATACGATGACAGATATTATTGTCGATATTATCGGCGCACTATTTATCGTCATCGTCG GCTATTTTGCACTGAAAAAAGGCCGACCATGGATGGAACGCTTTGAATTCAAGCGGAAAAATTGGAAGAAAGAACCGAAG AAAAAATAG
Upstream 100 bases:
>100_bases AAGTGATAAATTTGACTGCTTGTCTATTCCTAGTCTAAGATGGATGAGCAGTTTCTTTTTGCGAAAAAAGGGTATTACAT GATAGATTGGAGATGAGTGC
Downstream 100 bases:
>100_bases CGGTAAAAAACACCTCGGCACGTGGAGGTGTTTTTTGTTGTACAAAATCGCCAACAACTTTGGGTCTCAGAAACAATTGA CTGGCTCGTGGAACTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVTLRGDYIFLLFEIILGIFILLLPSIIARRFKFEIPGL VYILFIVFLYGSIYLGTVQKFYSTVPHWDKILHTFSGAMLGAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAF WEVYEYTFDGIMNLNMQRYNLSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFALKKGRPWMERFEFKRKNWKKEPK KK
Sequences:
>Translated_242_residues MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVTLRGDYIFLLFEIILGIFILLLPSIIARRFKFEIPGL VYILFIVFLYGSIYLGTVQKFYSTVPHWDKILHTFSGAMLGAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAF WEVYEYTFDGIMNLNMQRYNLSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFALKKGRPWMERFEFKRKNWKKEPK KK >Mature_242_residues MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVTLRGDYIFLLFEIILGIFILLLPSIIARRFKFEIPGL VYILFIVFLYGSIYLGTVQKFYSTVPHWDKILHTFSGAMLGAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAF WEVYEYTFDGIMNLNMQRYNLSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFALKKGRPWMERFEFKRKNWKKEPK KK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27769; Mature: 27769
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVTLRGDYIFLLFEIILGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHH FILLLPSIIARRFKFEIPGLVYILFIVFLYGSIYLGTVQKFYSTVPHWDKILHTFSGAML HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAFWEVYEYTFDGIMNLNMQRYN HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFALKKGRPWMERFEFKRKNWKKEPK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC KK CC >Mature Secondary Structure MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVTLRGDYIFLLFEIILGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHH FILLLPSIIARRFKFEIPGLVYILFIVFLYGSIYLGTVQKFYSTVPHWDKILHTFSGAML HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAFWEVYEYTFDGIMNLNMQRYN HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFALKKGRPWMERFEFKRKNWKKEPK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA