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The map label for this gene is nsrR [H]

Identifier: 226223260

GI number: 226223260

Start: 674500

End: 674916

Strand: Direct

Name: nsrR [H]

Synonym: Lm4b_00657

Alternate gene names: 226223260

Gene position: 674500-674916 (Clockwise)

Preceding gene: 226223259

Following gene: 226223261

Centisome position: 23.16

GC content: 39.57

Gene sequence:

>417_bases
ATGAAATTTTCCAAAGCAACCAATTATGCACTACATACGATGGTTTATTTAGCTAATTTGTCACCAGAAAAGTCTGTCGG
TGTGAAAGAACTTGCAACCAAGCAAAATGTGTCGCCAACTTATCTATCTAAAGTGTTGACGATGCTAGTGAAAGCTGGCT
TTATTGAATCAGTAACAGGCGTCAATGGTGGGTATAAGTTAGCGGAACCAGCAAGTAGTATTAGTTTTCTTGATGTCATT
CAAGCGATTGAAGGGAAGGGCGCCTTTTTCCATTGTGACCCTAAAAACCACAGCGAAAGCCAGCCGCACTGCTTGATTGG
CGAAGTGATGAATAAGGCGGAGCAACAAATGGAAGATTATTTAAGCAAACAAACAGTAGGTAGTATTGTCGTAGAAATTG
AAAAACATCAACATTAA

Upstream 100 bases:

>100_bases
TTTTTCCATTTTTGGAAAAGGTTTTTTAGTTATGAATTGACACTTCTGATTATAAGAGATATTATAGAGTGGTTAAGTCT
TTAATTAAGAAGGTGAAAAT

Downstream 100 bases:

>100_bases
AGGAGTGCTAAAATGAAACATCATCATAATCATCACGGGGAAGCTGGTTTTAAGCGGAAAGTAGATTATTTGGATCGACC
AGAGCGGAGTGAAGTGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSKVLTMLVKAGFIESVTGVNGGYKLAEPASSISFLDVI
QAIEGKGAFFHCDPKNHSESQPHCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH

Sequences:

>Translated_138_residues
MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSKVLTMLVKAGFIESVTGVNGGYKLAEPASSISFLDVI
QAIEGKGAFFHCDPKNHSESQPHCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH
>Mature_138_residues
MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSKVLTMLVKAGFIESVTGVNGGYKLAEPASSISFLDVI
QAIEGKGAFFHCDPKNHSESQPHCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=132, Percent_Identity=28.030303030303, Blast_Score=69, Evalue=9e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15144; Mature: 15144

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSKVLTMLVKAGFIESVTG
CCCCCHHHHHHHHHHHHHCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
VNGGYKLAEPASSISFLDVIQAIEGKGAFFHCDPKNHSESQPHCLIGEVMNKAEQQMEDY
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSKQTVGSIVVEIEKHQH
HHHHHHHHHHEEEECCCC
>Mature Secondary Structure
MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSKVLTMLVKAGFIESVTG
CCCCCHHHHHHHHHHHHHCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
VNGGYKLAEPASSISFLDVIQAIEGKGAFFHCDPKNHSESQPHCLIGEVMNKAEQQMEDY
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSKQTVGSIVVEIEKHQH
HHHHHHHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA