| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223233
Identifier: 226223233
GI number: 226223233
Start: 647041
End: 647385
Strand: Reverse
Name: 226223233
Synonym: Lm4b_00630
Alternate gene names: NA
Gene position: 647385-647041 (Counterclockwise)
Preceding gene: 226223234
Following gene: 226223232
Centisome position: 22.23
GC content: 35.36
Gene sequence:
>345_bases ATGTTAGATAAAAAAATTATTAGTGCGCTTAGTTATTTCAGTCTTTTCTTTGCCCCGGTCATTACTCCCGCGATTATCTG GTGTACAACAAAAGATAAAGAAATTCGGCATCATGTAAGATGGGCACTCCTCACACAGACAACTTTTGTCGCTGGTGTAG TTGTAATGATTTTACTTTACAACAATGTTCCATTTAGTACCAATAGTGCAGATACCATTAACTTTCTTGCCTTAGCTACT GTATTTTTTATCGTTTTTCTAAATGTATCGATACTCATTTTCAACTTGATTCGGGGAATTACACGTATCGTAAAGCATAG TGACGATAATTGGGCTAGATGTTAA
Upstream 100 bases:
>100_bases AACTGTCATCTTCCTCTGTATATCGTCACCTAATTCGATGGTTCCATTTCTCTTTCCCCGCTATACTAGACTTATAAACA AATGAGAGGATAGATGAGAA
Downstream 100 bases:
>100_bases GCTAACTTCCTAATTTATGCTATAATATAGTGTACTTTAGGAGGTTTTTTTGATGCGTTTTATTATTGCTTATTTATCGA TTTTTGTTTTAGGAATTTTT
Product: YvlA protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALLTQTTFVAGVVVMILLYNNVPFSTNSADTINFLALAT VFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC
Sequences:
>Translated_114_residues MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALLTQTTFVAGVVVMILLYNNVPFSTNSADTINFLALAT VFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC >Mature_114_residues MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALLTQTTFVAGVVVMILLYNNVPFSTNSADTINFLALAT VFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13007; Mature: 13007
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALLTQTTFVAGVVVMILLY CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALLTQTTFVAGVVVMILLY CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA